ggKbase home page

SCNpilot_bf_inoc_scaffold_434_curated_70

Organism: scnpilot_dereplicated_Bacteroidia_2

near complete RP 52 / 55 MC: 5 BSCG 50 / 51 MC: 5 ASCG 12 / 38 MC: 4
Location: 89797..91092

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=1562970 species="Bacteria; Ba similarity UNIPROT
DB: UniProtKB
  • Identity: 82.5
  • Coverage: 428.0
  • Bit_score: 745
  • Evalue 5.50e-212
Fe-S oxidoreductase; K14441 ribosomal protein S12 methylthiotransferase [EC:2.-.-.-] similarity KEGG
DB: KEGG
  • Identity: 67.3
  • Coverage: 428.0
  • Bit_score: 610
  • Evalue 4.80e-172
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000374D6B6 similarity UNIREF
DB: UNIREF100
  • Identity: 92.1
  • Coverage: 428.0
  • Bit_score: 810
  • Evalue 5.80e-232

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Porphyromonadaceae bacterium ING2-E5B → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1296
ATGGTCAATAACAAGATAGATGTCGTTACGCTGGGTTGTTCCAAAAACCTTGTCGATTCTGAATTGTTGATGCGGCAACTGGTTGCCAACGGATATACCGTGGAACATGATCCTCAAACACCCCGCGGTGATATTGCCGTGATCAACACCTGTGGATTTATCGGCGATGCAAAAGAGGAATCGATCAACATGATTCTTTCCTTTGCCGAAGCGAAGAAACGGAACAAACTCAAAAAACTGTTTGTGATGGGGTGTCTCTCCGAACGATACAGGGAAGAATTGCAGGAAGAGATTCCCGAAGTGGACAAGTTTTACGGGAAATTCGACTGGCGGGCGCTTATTGGCGATCTCGGTAAATCTTATTACAAGGAGTGGGAATTCGACCGGTCGTTATCCACGCCACCTCATTATGCCTACGTGAAAATATCGGAAGGGTGCGACAGGACCTGTTCATACTGCTCCATCCCCTTGATCACGGGAAAATACAGGTCCCGTCCCATTGAGGGGATCGAAGAAGAGGTGCGGCGATTAGTAGCCAAAGGGGTGAAGGAATTCCAGTTTATCGCCCAGGATCTTACCTATTACGGGCTCGACCTATACCGGCAGATGAAACTGCCCGAATTGGTGGAGCGGGTGTCGGATATAGAAGGAGTGGAGTGGATCCGCCTTCATTATGCTTATCCTGCCCATTTCCCGACAGACCTGTTGCGGGTGATACGCGAACGCGAGAATGTATGTAACTATCTCGATATTGCTTTGCAGCATATTAGCGACCACATGTTGAAAACCATGCGGCGCAATATCACCAAACAACAGACCATTGATCTGGTCCAGCGTTTCCGGGACGAGGTGCCCGGTATCCATCTGCGTACGACCATGATGGTGGGGCATCCCGGCGAAACGGAAGAAGATTATCTCGAACTGCTCGATTTCGTGGAAAAGACCGGCTTTGAACGGTTGGGCGCTTTCCCGTATTCACATGAAGAAGATACGTATAATGATAGGCATTATGCTGATGACGTGCCTGCAGGAGTGAAGCAGGAAAGAATGAACAGGTTGATGGAACTGCAGGAAGGAATTGCCCTGTCGGTGAATGAAGCAAAAGTGGGGGAGACCCTGAAGGTGATCATCGACCGGGAAGATCCCGAGTACTATGTAGGGCGTACCGAATTCGATTCACCTGAGGTGGATGGGGAGGTGCTGATTGATAAGACGAATCAACTGGAAATTGGCCGGTTTTACGATGTGAAAATCAAGGGGGCTATGCCTTTTGATTTGATGGGAGGGTTGGAGTAA
PROTEIN sequence
Length: 432
MVNNKIDVVTLGCSKNLVDSELLMRQLVANGYTVEHDPQTPRGDIAVINTCGFIGDAKEESINMILSFAEAKKRNKLKKLFVMGCLSERYREELQEEIPEVDKFYGKFDWRALIGDLGKSYYKEWEFDRSLSTPPHYAYVKISEGCDRTCSYCSIPLITGKYRSRPIEGIEEEVRRLVAKGVKEFQFIAQDLTYYGLDLYRQMKLPELVERVSDIEGVEWIRLHYAYPAHFPTDLLRVIRERENVCNYLDIALQHISDHMLKTMRRNITKQQTIDLVQRFRDEVPGIHLRTTMMVGHPGETEEDYLELLDFVEKTGFERLGAFPYSHEEDTYNDRHYADDVPAGVKQERMNRLMELQEGIALSVNEAKVGETLKVIIDREDPEYYVGRTEFDSPEVDGEVLIDKTNQLEIGRFYDVKIKGAMPFDLMGGLE*