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SCNpilot_bf_inoc_scaffold_215_curated_70

Organism: scnpilot_dereplicated_Bacteroidia_2

near complete RP 52 / 55 MC: 5 BSCG 50 / 51 MC: 5 ASCG 12 / 38 MC: 4
Location: comp(102143..102667)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor id=3696472 bin=GWC2_Bacteroidetes_46_850 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes similarity UNIREF
DB: UNIREF100
  • Identity: 73.8
  • Coverage: 168.0
  • Bit_score: 262
  • Evalue 4.10e-67
RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 37.8
  • Coverage: 164.0
  • Bit_score: 123
  • Evalue 7.10e-26
Tax=GWC2_Bacteroidetes_46_850_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 73.8
  • Coverage: 168.0
  • Bit_score: 262
  • Evalue 5.70e-67

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Taxonomy

GWC2_Bacteroidetes_46_850_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 525
ATGAAGTCGCAACATACTATATCCAATATAGATCCAGCTTCTTTCCGGATTATCTATGACCTGTATTTTGAGCCGGTATGTGTGTTTCTCTCTTATTATACCAGGGATGTAGCTGCCATTGAGGATGTCGTACAGGATGTTTTTGTCAGTTTGTGGGAACATAAAGAATATTTGGAAATTCAATATCTGAAAACCTACCTTTACAATGCAGCCCGTAACCGGATGCTGAACTACCTTCGAAACAGGGAAAACAGGATTGCTTTACTTGCTGAATGGATAAAGGAGAACGAAACGGTGGAAGCAAGTCCGGACTGCTATGATATGGAGGAATTCTCCGTGATATTGAGAAAAGCTGTGAATCTGTTGCCTGACCGGTGCAAGGAAATATTTATCCTGAGTAAAGAACAGAAACTAACCTATCAACAAATAGCGGATTATTACCATATCTCATTAAAGACAGTAGAAAGCCAAATGGCAATTGCCTTAAAACGAATACGCAAGTATATCGCTTCTTTTTTAGCCTAA
PROTEIN sequence
Length: 175
MKSQHTISNIDPASFRIIYDLYFEPVCVFLSYYTRDVAAIEDVVQDVFVSLWEHKEYLEIQYLKTYLYNAARNRMLNYLRNRENRIALLAEWIKENETVEASPDCYDMEEFSVILRKAVNLLPDRCKEIFILSKEQKLTYQQIADYYHISLKTVESQMAIALKRIRKYIASFLA*