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SCNpilot_bf_inoc_scaffold_321_curated_10

Organism: scnpilot_dereplicated_Bacteroidia_2

near complete RP 52 / 55 MC: 5 BSCG 50 / 51 MC: 5 ASCG 12 / 38 MC: 4
Location: comp(6292..7536)

Top 3 Functional Annotations

Value Algorithm Source
Probable sigma-70 factor, ECF subfamily n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11S84_CYTH3 similarity UNIREF
DB: UNIREF100
  • Identity: 74.6
  • Coverage: 410.0
  • Bit_score: 629
  • Evalue 3.00e-177
ECF subfamily RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 74.6
  • Coverage: 410.0
  • Bit_score: 629
  • Evalue 9.50e-178
Probable sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:ABG59730.1}; TaxID=269798 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.6
  • Coverage: 410.0
  • Bit_score: 629
  • Evalue 4.20e-177

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Taxonomy

Cytophaga hutchinsonii → Cytophaga → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1245
TTGGATAAATCCAAGTCATATAACGAGTTATTACCTTATTTGTTCCGACAGGAATATGCTAAGATGACGGCTGTACTCTGCCGTCATTTTAGCTTGTCGCATATTGAAATTGCTGAAGATATCGCCGGCGATACATTCTTGAAAGCATCCGAAGATTGGGCTATCTACGGCATGCCCGATAACCCTACAGCATGGCTATATACCGTGGCTGGAAACAAGATAAAAGACTATTTCAAGCACAAATCCGTTTTTGAAAATAAAGTCAGGAATGCCATAACACCCGTAGATACCGATTTCGAAAAGGATTTAGAATTTAACAATCAAATCATTGCGGACAGTCAATTAGCAATGATTTTTGCCGTATGTAATCCCGCCAACCCGATAGAAGCCCAAATTGCGTTAGCACTTCAAATCTTATGTGGTTTCAGTGTTGAAGAAATAGCCAACGCTTTTTTAACAAATAGGGAAAACATAAAAAAGAGACTGCAAAGAGCAAGGACTAATTTGCGAAATGATAACTTTGAAATCAGCGATTTAACGGAAACTGATATAAAAACGAGATTGGATACCGTCCTAAAAACGTTGTACCTACTTTTCAACGAGGGTTATTTCTCCAAGACCAATAGCCAGCTAATCAGAAAAGAGCTTTGCACCGAAGCCGTCAGATTAGCGGTAGTCCTGACTGAAAACAAACTAACCAATACCCCACAACTGAATGCCTTGCTTGCCTTAATGTGTTTCCAGAGTTCGAGATTGGAAGCAAGAACAGGCATAAACGGTGAGGCCATACTTTTTGACAAACAGGATAAAAGTCTTTGGGATAAATCACTTATCGACAGGGGTAATTACTACTTGATCAATGCATTTGATGATACAGAAATATCAAAGTATCACTTAGAAGCAAGCATAGCCTATTGGCATACTACTCCCACAGATGACAACAAGTGGGAACATATCTTGCAATTATATAACAAACTGTTACTCATCGAGTACTCTCCTGTTACAGCCCTGAACCGGACATTTGCATTTTCCAAGGTCTACGGCTATGAAAAAGCAATAAAAGAGGTAGAAAGATTAAATCTTCCGGAAAGCAATTACTTCCATGAGTTATTAGGCTATTTGTATTCTAATGTGGATATTGATACAGCAATTCAACACTATACAAAAGCAATAGAATTAACCAAATCCAAAATAGAACAAGAGACACTCAAACAAGAAATCAACAGATTGCTACTGCTAAAGTAG
PROTEIN sequence
Length: 415
LDKSKSYNELLPYLFRQEYAKMTAVLCRHFSLSHIEIAEDIAGDTFLKASEDWAIYGMPDNPTAWLYTVAGNKIKDYFKHKSVFENKVRNAITPVDTDFEKDLEFNNQIIADSQLAMIFAVCNPANPIEAQIALALQILCGFSVEEIANAFLTNRENIKKRLQRARTNLRNDNFEISDLTETDIKTRLDTVLKTLYLLFNEGYFSKTNSQLIRKELCTEAVRLAVVLTENKLTNTPQLNALLALMCFQSSRLEARTGINGEAILFDKQDKSLWDKSLIDRGNYYLINAFDDTEISKYHLEASIAYWHTTPTDDNKWEHILQLYNKLLLIEYSPVTALNRTFAFSKVYGYEKAIKEVERLNLPESNYFHELLGYLYSNVDIDTAIQHYTKAIELTKSKIEQETLKQEINRLLLLK*