ggKbase home page

SCNpilot_bf_inoc_scaffold_2931_curated_5

Organism: scnpilot_dereplicated_Bacteroidia_2

near complete RP 52 / 55 MC: 5 BSCG 50 / 51 MC: 5 ASCG 12 / 38 MC: 4
Location: comp(6379..6735)

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor {ECO:0000313|EMBL:CEA15973.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.0
  • Coverage: 118.0
  • Bit_score: 188
  • Evalue 4.20e-45
SusC/RagA family TonB-linked outer membrane protein id=1934070 bin=GWD2_Bacteroidales_45_23 species=Bacteroides fragilis genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes similarity UNIREF
DB: UNIREF100
  • Identity: 71.4
  • Coverage: 119.0
  • Bit_score: 185
  • Evalue 3.30e-44
TonB-dependent receptor plug similarity KEGG
DB: KEGG
  • Identity: 66.4
  • Coverage: 119.0
  • Bit_score: 170
  • Evalue 3.50e-40

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Porphyromonadaceae bacterium ING2-E5B → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 357
GATCGCACCAATGCCTTCTATCCTCGTCCTTGGAATATGGGTGGTTCTAACTCGGGTAACAACCTGCAGGTACAGTCACGCTACTTGTTGGATATGTCTTATTTAAGAGTAAAAAATATGACTGTAGGTTACACCTTGCCTTCAGCGCTGTTAAAGAAAGCCTATATCAACAATGCCAGAGTGTATGTTTCGTTGGAAAACTTCTTGACATTCGACAATTTGAATGATCTGCCAATCGATCCAGAATCGATTTCCGGTTATTCAATGTATAATAGTACCAACTATAATCTTGGAAGAACTGGTACAGGTACACCAACATTTAAGAGTGTTTCATTTGGTCTGCAATTAGGATTTTAA
PROTEIN sequence
Length: 119
DRTNAFYPRPWNMGGSNSGNNLQVQSRYLLDMSYLRVKNMTVGYTLPSALLKKAYINNARVYVSLENFLTFDNLNDLPIDPESISGYSMYNSTNYNLGRTGTGTPTFKSVSFGLQLGF*