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SCNpilot_bf_inoc_scaffold_897_curated

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Displaying items 31-60 of 74 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_897_curated_31
Cupriavidus sp. SK-4, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31478..31714
DNA (237bp) protein (79aa)
Adenosine deaminase; K01488 adenosine deaminase [EC:3.5.4.4]
Adenosine deaminase n=1 Tax=Caulobacter sp. AP07 RepID=J2GFV6_9CAUL
Adenosine deaminase {ECO:0000313|EMBL:EYS86885.1}; TaxID=574750 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-4.;"
SCNpilot_bf_inoc_scaffold_897_curated_32
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31748..32536
DNA (789bp) protein (263aa)
adenosine deaminase (EC:3.5.4.4); K01488 adenosine deaminase [EC:3.5.4.4]
Adenosine deaminase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V6T3_VARPE
Variovorax paradoxus strain MEDvA23 contig_20, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ33707.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
SCNpilot_bf_inoc_scaffold_897_curated_33
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32566..33552
DNA (987bp) protein (329aa)
Putative Bug-like extracytoplasmic solute binding receptor, TTT family n=1 Tax=Variovorax paradoxus B4 RepID=T1X8K0_VARPD
putative Bug-like extracytoplasmic solute binding receptor, TTT family
Putative Bug-like extracytoplasmic solute binding receptor, TTT family {ECO:0000313|EMBL:AGU48878.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_bf_inoc_scaffold_897_curated_34
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33628..34491)
DNA (864bp) protein (288aa)
3-mercaptopyruvate sulfurtransferase (EC:2.8.1.2); K01011 thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
3-mercaptopyruvate sulfurtransferase {ECO:0000313|EMBL:ABM41269.1}; EC=2.8.1.2 {ECO:0000313|EMBL:ABM41269.1};; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
3-mercaptopyruvate sulfurtransferase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W4U4_ACISJ
SCNpilot_bf_inoc_scaffold_897_curated_35
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34500..35120)
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI0002DC7C84
hypothetical protein; K15270 S-adenosylmethionine uptake transporter
Putative transmembrane protein {ECO:0000313|EMBL:ABD70590.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
SCNpilot_bf_inoc_scaffold_897_curated_36
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35432..36568)
DNA (1137bp) protein (379aa)
Rieske (2Fe-2S) domain protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MEU5_ACIET
rieske (2fe-2S) domain-containing protein
Rieske (2Fe-2S) domain protein {ECO:0000313|EMBL:ACM32431.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
SCNpilot_bf_inoc_scaffold_897_curated_37
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36798..37037
DNA (240bp) protein (80aa)
exodeoxyribonuclease VII small subunit; K03602 exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
Exodeoxyribonuclease 7 small subunit n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CT95_VARPS
Tax=GWA2_Curvibacter_64_110_curated
SCNpilot_bf_inoc_scaffold_897_curated_38
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37034..37930
DNA (897bp) protein (299aa)
geranyltranstransferase (EC:2.5.1.10); K00795 farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
Geranyltranstransferase {ECO:0000313|EMBL:ADX47047.1}; EC=2.5.1.10 {ECO:0000313|EMBL:ADX47047.1};; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
Geranyltranstransferase n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q7H4_ACIAP
SCNpilot_bf_inoc_scaffold_897_curated_39
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37933..39837
DNA (1905bp) protein (635aa)
1-deoxy-d-xylulose-5-phosphate synthase; K01662 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=DXS_ACIET rbh
Tax=GWA2_Curvibacter_64_110_curated
SCNpilot_bf_inoc_scaffold_897_curated_40
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40112..41107
DNA (996bp) protein (332aa)
Extracellular solute-binding protein, family 7 n=2 Tax=Alicycliphilus denitrificans RepID=E8U277_ALIDB
family 7 extracellular solute-binding protein
Twin-arginine translocation pathway signal {ECO:0000313|EMBL:GAO26987.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_bf_inoc_scaffold_897_curated_41
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41237..42649)
DNA (1413bp) protein (471aa)
TRAP dicarboxylate transporter, DctM subunit n=2 Tax=Alicycliphilus denitrificans RepID=E8U279_ALIDB
trap dicarboxylate transporter, dctm subunit
TRAP dicarboxylate transporter, DctM subunit {ECO:0000313|EMBL:ADU98883.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_bf_inoc_scaffold_897_curated_42
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42646..43071)
DNA (426bp) protein (142aa)
TRAP dicarboxylate transporter, DctM subunit n=2 Tax=Alicycliphilus denitrificans RepID=E8U279_ALIDB
TRAP dicarboxylate transporter subunit DctM
TRAP dicarboxylate transporter, DctM subunit {ECO:0000313|EMBL:ADU98883.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_bf_inoc_scaffold_897_curated_43
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43899..44639
DNA (741bp) protein (247aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Acidovorax sp. NO-1 RepID=H0BRR6_9BURK
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EHL24932.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
binding-protein-dependent transport system inner membrane protein
SCNpilot_bf_inoc_scaffold_897_curated_44
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44636..45382
DNA (747bp) protein (249aa)
Probable ATP-binding component of ABC transporter n=3 Tax=Bordetella bronchiseptica RepID=K0MTQ7_BORBM
ABC transporter ATP-binding protein
Tax=GWA2_Curvibacter_64_110_curated
SCNpilot_bf_inoc_scaffold_897_curated_45
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45382..46209
DNA (828bp) protein (276aa)
Extracellular solute-binding protein family 1 n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T7A9_ACIDE
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:EER59630.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
family 1 extracellular solute-binding protein; K05772 tungstate transport system substrate-binding protein
SCNpilot_bf_inoc_scaffold_897_curated_46
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46322..47521
DNA (1200bp) protein (400aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI00037D9F09
hypothetical protein
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
SCNpilot_bf_inoc_scaffold_897_curated_47
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47530..47709)
DNA (180bp) protein (60aa)
molybdate ABC transporter ATPase; K02017 molybdate transport system ATP-binding protein [EC:3.6.3.29]
Molybdenum import ATP-binding protein ModC {ECO:0000256|HAMAP-Rule:MF_01705}; EC=3.6.3.29 {ECO:0000256|HAMAP-Rule:MF_01705};; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;"
Molybdate ABC transporter, ATPase subunit n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WLW5_VEREI
SCNpilot_bf_inoc_scaffold_897_curated_48
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47739..48611)
DNA (873bp) protein (291aa)
Molybdenum import ATP-binding protein ModC {ECO:0000256|HAMAP-Rule:MF_01705}; EC=3.6.3.29 {ECO:0000256|HAMAP-Rule:MF_01705};; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
molybdate ABC transporter ATPase; K02017 molybdate transport system ATP-binding protein [EC:3.6.3.29]
Molybdenum ABC transporter, ATP-binding protein n=1 Tax=Polaromonas sp. CF318 RepID=J2TTK8_9BURK
SCNpilot_bf_inoc_scaffold_897_curated_49
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48642..49331)
DNA (690bp) protein (230aa)
Molybdate ABC transporter, permease protein n=1 Tax=Polaromonas sp. CF318 RepID=J2LA63_9BURK
Molybdate ABC transporter, permease protein {ECO:0000313|EMBL:EJL82058.1}; Flags: Precursor;; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
modB; molybdate transport system permease; K02018 molybdate transport system permease protein
SCNpilot_bf_inoc_scaffold_897_curated_50
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49399..50172)
DNA (774bp) protein (258aa)
Molybdenum ABC transporter, periplasmic molybdate-binding protein ModA n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HLT3_RUBGI
modA; molybdenum ABC transporter, periplasmic molybdate-binding protein ModA; K02020 molybdate transport system substrate-binding protein
Molybdenum ABC transporter, periplasmic molybdate-binding protein ModA {ECO:0000313|EMBL:BAL93970.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
SCNpilot_bf_inoc_scaffold_897_curated_51
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50262..51017
DNA (756bp) protein (252aa)
Putative transcriptional regulator, ModE family n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21UI5_RHOFD
ModE family transcriptional regulator; K02019 molybdate transport system regulatory protein
Putative transcriptional regulator, ModE family {ECO:0000313|EMBL:ABD70568.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
SCNpilot_bf_inoc_scaffold_897_curated_52
Curvibacter putative symbiont of Hydra magnipapillata, Curvibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51331..51717)
DNA (387bp) protein (129aa)
Putative fluoride ion transporter CrcB n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y9V5_9BURK
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=667019 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Curvibacter.;" source="Curvibacter putative symbiont of Hydra magnipapillata.;"
chromosome condensation membrane protein
SCNpilot_bf_inoc_scaffold_897_curated_53
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51754..52752)
DNA (999bp) protein (333aa)
Recombination associated protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNP5_9BURK
Recombination associated protein {ECO:0000313|EMBL:EIK90835.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
rdgC; recombination associated protein; K03554 recombination associated protein RdgC
SCNpilot_bf_inoc_scaffold_897_curated_54
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52954..54249)
DNA (1296bp) protein (432aa)
TRAP dicarboxylate transporter-DctM subunit n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12CN4_POLSJ
TRAP dicarboxylate transporter subunit DctM
TRAP dicarboxylate transporter-DctM subunit {ECO:0000313|EMBL:ABE43708.1}; Flags: Precursor;; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
SCNpilot_bf_inoc_scaffold_897_curated_55
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54242..54754)
DNA (513bp) protein (171aa)
Tripartite ATP-independent periplasmic transporter DctQ id=1262632 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
dctM; small permease
Tax=BJP_08E140C01_Burkholderiales_65_30
SCNpilot_bf_inoc_scaffold_897_curated_56
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54849..55835)
DNA (987bp) protein (329aa)
Extracellular solute-binding protein, family 7 n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V6M5_VARPE
family 7 extracellular solute-binding protein
Extracellular solute-binding protein, family 7 {ECO:0000313|EMBL:ADU35981.1}; Flags: Precursor;; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
SCNpilot_bf_inoc_scaffold_897_curated_57
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56073..59783
DNA (3711bp) protein (1237aa)
5-oxoprolinase (EC:3.5.2.9); K01469 5-oxoprolinase (ATP-hydrolysing) [EC:3.5.2.9]
5-oxoprolinase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035D8B9B
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_bf_inoc_scaffold_897_curated_58
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(59925..60323)
DNA (399bp) protein (133aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZX8_9BURK
hypothetical protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_bf_inoc_scaffold_897_curated_59
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60431..61591)
DNA (1161bp) protein (387aa)
Tetratricopeptide TPR_4 n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WPR1_VEREI
hypothetical protein
Lipopolysaccharide assembly protein B {ECO:0000256|HAMAP-Rule:MF_00994}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;"
SCNpilot_bf_inoc_scaffold_897_curated_60
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61581..61880)
DNA (300bp) protein (100aa)
Putative integral membrane protein n=1 Tax=Acidovorax sp. CF316 RepID=J1EMN2_9BURK
Putative integral membrane protein {ECO:0000313|EMBL:EJE53444.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
hypothetical protein
Displaying items 31-60 of 74 in total

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