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SCNpilot_bf_inoc_scaffold_655_curated_4

Organism: scnpilot_dereplicated_Burkholderiales_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 2968..3792

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase Rsu; K06182 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] similarity KEGG
DB: KEGG
  • Identity: 75.1
  • Coverage: 273.0
  • Bit_score: 408
  • Evalue 1.70e-111
RNA-binding S4 domain protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TX53_ALIDB similarity UNIREF
DB: UNIREF100
  • Identity: 75.1
  • Coverage: 273.0
  • Bit_score: 408
  • Evalue 5.60e-111
Pseudouridine synthase Rsu {ECO:0000313|EMBL:AEB82926.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.1
  • Coverage: 273.0
  • Bit_score: 408
  • Evalue 7.80e-111

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Taxonomy

Alicycliphilus denitrificans → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 825
ATGACCACCGACACGCCCCGCTTTCACCGCGCGCCGCGGCCTGCCGCCGCCGCCCCGGCGCCGACGACGGGCGGCGCGATCCGCCTGAACAAGCGCCTGGCCGAACTGGGCCTGTGCTCGCGCCGCGAGGCCGACGACTGGATCGAGCGCGGCTGGGTGCGCGTCAACGGCCAGCTGGCGGTGATGGGGCTGAAGGTGGGGCCGCAAGACCAGGTCACGGTCGACCGCCGCGCCGACGCCGCGCAGGCGCAGCGCGTCACCATCCTGCTGCACAAGCCGGTGGGCTACGTCAGCGGCCAGGCCGAGGACGGCCACCAGCCGGCGGTGACCCTGATCCAGGCGCGCAGCCACTGGACGGGCGACGCCAGCCGCACCCGCTTCGCGCCGGCGCAGCTCAAGGGGCTGGCGCCGGCCGGGCGGCTGGACATCGACTCCACCGGCCTGCTGGTGCTGACGCAGGACGGCCGCGTGGCGCGCCAGCTGATCGGCGAGCACTCGGATGTCGACAAGGAATACCTGGTGCGCGTCAGCTACGGCGCGCTGGCCGAGAACGTGCAGGCCGCCTTTCCGGCCGCGCAACTGGCGCGCCTGCGCCATGGCCTGGCCCTGGACGGCCAGCCGCTGCGGCCGGCGCTGGTCGACTGGCAGAACCCCGAGCAATTGCGCTTCGTGCTGCGTGAAGGCAAGAAGCGCCAGATCCGCCGCATGTGCGAGCTGGTCGGCCTGACGGTGACCGGCCTCAAGCGCGTGCGCATCGGCCGCGTGCGCCTGGGCCAGCTGCCCGCCGGGCAATGGCGCTACCTGGGCGAGCACGAGGCGTTCTGA
PROTEIN sequence
Length: 275
MTTDTPRFHRAPRPAAAAPAPTTGGAIRLNKRLAELGLCSRREADDWIERGWVRVNGQLAVMGLKVGPQDQVTVDRRADAAQAQRVTILLHKPVGYVSGQAEDGHQPAVTLIQARSHWTGDASRTRFAPAQLKGLAPAGRLDIDSTGLLVLTQDGRVARQLIGEHSDVDKEYLVRVSYGALAENVQAAFPAAQLARLRHGLALDGQPLRPALVDWQNPEQLRFVLREGKKRQIRRMCELVGLTVTGLKRVRIGRVRLGQLPAGQWRYLGEHEAF*