ggKbase home page

SCNpilot_bf_inoc_scaffold_965_curated_9

Organism: scnpilot_dereplicated_Burkholderiales_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(7570..8631)

Top 3 Functional Annotations

Value Algorithm Source
Candidate type IV pilus assembly protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XY84_RAMTT similarity UNIREF
DB: UNIREF100
  • Identity: 72.5
  • Coverage: 353.0
  • Bit_score: 529
  • Evalue 2.10e-147
pilM; type IV pilus assembly protein; K02662 type IV pilus assembly protein PilM similarity KEGG
DB: KEGG
  • Identity: 72.5
  • Coverage: 353.0
  • Bit_score: 529
  • Evalue 6.70e-148
Candidate type IV pilus assembly protein {ECO:0000313|EMBL:AEG91877.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.5
  • Coverage: 353.0
  • Bit_score: 529
  • Evalue 3.00e-147

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ramlibacter tataouinensis → Ramlibacter → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1062
TTGTTCAGCCGTCAACCGGCGCCCTTGATCGGGCTCGATGTCAGCACGTCCAGCGTCAAGCTGGTCGAGCTGGGGCAGGATCGCTCCGGCAACCTGACGCTGGAGCGCTGCGGCATCGAGCTGCTGGAGTCAGGTTGGGTCAGCGACGGCAACATCGAGAAATTCGATGAGGTGGTCGAGGCGACGCGCCGGCTGGTGAACAGGAGTGGCTCCAAGACCAAGCATGTCGCCATGGCCTTGCCTGCGTCGGTGGTGATCAGCAAGAAGATCATTTTACCGGGCGGCCTGAGCGAGCGTGAAATGGAGGTCCAGGTCGAGTCCGAGGCCAACCAGTACATCCCCTTCTCGCTCGACGAGGTGGCGCTGGATTTCTGCGTGGTCGGGCCCAGTTCGACGTCGGCGGGCGATGTGGAAGTCGTGATCGCCGCCTCGCGCAAGGAAAAGGTCGAGGACCGCCAGGGCCTGGCCGAAGCGGTGGGCCTGACGCCGGTGGTGATGGACGTGGAGACCTACGCCTCGCGTCTGGCGGCCAGTCGGATCATTGGGCGCCTGCCTGCTGGTGGGGTGGACGCGGTCATCGCGCTGTTCGAGGTCGGCGCCCTGACGTCGACGCTGCAGGTCATGCGCAACGATGACCTGATCTACGAGCGCGACCAGGTGTTCGGCGGCGCCCAGTTGACCCAGATGCTGGTGCGTCAATACGGCTTCACGCTCGATGAGGCCGAGACCAAGAAGCGCGCCGGCGAGTTACCCGACGACTACGGCCCCGTGGTGCTGCAACCCTTTGTCGAATCGCTGGCCCAGGAAATCGAGCGCGCCCTCAAGTTTTTCTTCACCAGCACGCCGCATCACCGGGTGGACTACATCCTGCTCGCGGGGGGCACAGCCGGACTGCCTGGCCTGACCGAGGTCGTGACGCGGCTCACCTCGTTTCCCTGCCAGGTGGTCAATCCGTTCGACGGCATGGACGCGGGTCGCATGGTGCGCGAGAAGAGAATGCTGCGCGAGGCGCCGTCTTACCTGACGGCCTGCGGCCTGGCGATGCGGAGGTTTTTGCGGTGA
PROTEIN sequence
Length: 354
LFSRQPAPLIGLDVSTSSVKLVELGQDRSGNLTLERCGIELLESGWVSDGNIEKFDEVVEATRRLVNRSGSKTKHVAMALPASVVISKKIILPGGLSEREMEVQVESEANQYIPFSLDEVALDFCVVGPSSTSAGDVEVVIAASRKEKVEDRQGLAEAVGLTPVVMDVETYASRLAASRIIGRLPAGGVDAVIALFEVGALTSTLQVMRNDDLIYERDQVFGGAQLTQMLVRQYGFTLDEAETKKRAGELPDDYGPVVLQPFVESLAQEIERALKFFFTSTPHHRVDYILLAGGTAGLPGLTEVVTRLTSFPCQVVNPFDGMDAGRMVREKRMLREAPSYLTACGLAMRRFLR*