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SCNpilot_bf_inoc_scaffold_769_curated_2

Organism: scnpilot_dereplicated_Burkholderiales_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(41..514)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=768671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.2
  • Coverage: 107.0
  • Bit_score: 113
  • Evalue 3.00e-22
hypothetical protein n=1 Tax=Methylovulum miyakonense RepID=UPI000378B17D similarity UNIREF
DB: UNIREF100
  • Identity: 56.7
  • Coverage: 97.0
  • Bit_score: 119
  • Evalue 3.90e-24
hypothetical protein; K07065 similarity KEGG
DB: KEGG
  • Identity: 48.1
  • Coverage: 108.0
  • Bit_score: 108
  • Evalue 2.80e-21

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Taxonomy

Thiocapsa marina → Thiocapsa → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 474
GTGGCCGCGCTGCCCACGCAGGCACAGGGCTGGATCACCACCTGGCCTGTGCTCACCGAAGCCACCCACCTGATCACACGCTGGGTGGGCACTGCCGCGGCGCAGGCGCTGCTGCGCGAGGTGGCCGACGGCGCCATTGCCGTGTGGTCCTGGCCCGCTGAGCACACGGCACGGCTGCCCGATCTGATGCACCGCTACACGCGCCTGCCCATGGATCTGGCCGATGCCTCGCTGGTGCTGCTGGCCGAGCACCTGGGCCACGGCCGCATCCTGACCACCGATGAGCGCGACTTCGGCGCCTATCGCTTCAAGAGCCGCGAGCCGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGGCGCCAGCCGCACCCAGCCTGTCGCCGGCTCGCCGCGCCTGGCTGCGCTTTCGGCGCAACCGGCTGGGCCTGTGGAGCCTGGTGCTGTTCGTGGCCCTGGTGGGGCTTAG
PROTEIN sequence
Length: 158
VAALPTQAQGWITTWPVLTEATHLITRWVGTAAAQALLREVADGAIAVWSWPAEHTARLPDLMHRYTRLPMDLADASLVLLAEHLGHGRILTTDERDFGAYRFKSREPXXXXXXXXXXXXXGASRTQPVAGSPRLAALSAQPAGPVEPGAVRGPGGA*