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SCNpilot_bf_inoc_scaffold_951_curated_28

Organism: scnpilot_dereplicated_Burkholderiales_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(28575..28820)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein Hfq n=1 Tax=Acidovorax sp. CF316 RepID=J0KU30_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 91.4
  • Coverage: 81.0
  • Bit_score: 148
  • Evalue 2.40e-33
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.4
  • Coverage: 81.0
  • Bit_score: 148
  • Evalue 3.30e-33
hfq; RNA-binding protein Hfq similarity KEGG
DB: KEGG
  • Identity: 90.1
  • Coverage: 81.0
  • Bit_score: 147
  • Evalue 1.70e-33

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Taxonomy

Acidovorax sp. CF316 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 246
GTGAGCAACAAAGGGCAACTCCTGCAAGACCCGTTTCTGAACACCCTGCGTCGTGAGCACATCCCGGTCTCCATCTATCTGGTGAACGGCATCAAGCTCCAGGGTCAGATCGAATCCTTCGACCAGTACGTCGTGCTGTTGCGCAACAACGTGACGCAGATGGTGTACAAGCACGCGATCTCCACCATCGTGCCGGGTCGTCCGGTCAACTTCGCCACCGGCGCGGAAACCCCGGATTCGGATTGA
PROTEIN sequence
Length: 82
VSNKGQLLQDPFLNTLRREHIPVSIYLVNGIKLQGQIESFDQYVVLLRNNVTQMVYKHAISTIVPGRPVNFATGAETPDSD*