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SCNpilot_bf_inoc_scaffold_1200_curated_15

Organism: scnpilot_dereplicated_Burkholderiales_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 16388..17272

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI0002DC811E similarity UNIREF
DB: UNIREF100
  • Identity: 62.2
  • Coverage: 312.0
  • Bit_score: 387
  • Evalue 1.40e-104
histone deacetylase similarity KEGG
DB: KEGG
  • Identity: 63.1
  • Coverage: 306.0
  • Bit_score: 382
  • Evalue 1.40e-103
Histone deacetylase {ECO:0000313|EMBL:ADU36151.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.7
  • Coverage: 306.0
  • Bit_score: 382
  • Evalue 6.40e-103

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 885
ATGAAGACCTTCTATTCGACGCAACTGAGTTTGCCCTTGCCGCCGGGCCACCGCTTCCCGATGGGCAAGTACGCCGCCTTGCGCGATCGCCTGGCAGCCGAGTGCGAGGGGCTGCGACTGGCGCAGGCGCCGCCGGCCAGCGACGCCGAGCTGGCGCTGGCGCATGCGCCGGCCTATGTCGCCGCGGTGGCGCAGGGCCGGCTGGATGCGCGGGCGCAGCGCGAGATCGGCTTTCCGTGGAGCGAAGCGATGGTCGAGCGCTCGCGCCGCTCGGTCGGCGCCAGCATCCAGGCCACGCGCGTGGCGCAGCGCGAGGGCGTGGCGGCCAACCTGGCTGGCGGCACGCACCACGCCAGCGCACAAGCCGGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCATCGCCGTGATCGACCTCGACGTGCACCAGGGCAATGGCACGGCCAGCATCTTCGCCGACGATCCCAGCGTGTTCACGCTGTCGCTGCATGGCGAGAAGAACTTTCCGTTCCGCAAGGTGGCGGGCGACCTGGACGTGGGGCTGCCCGACGGCACGGGTGACCAGGCCTACCTGGACGCGCTGGATCTGGCGCTGGTCGAGCTGGACAGCCGCTTTCGCCCCGATGCCGTGTTCTACCTGGCCGGCGCCGACCCGCACGAGGGCGACCGCCTGGGGCGCCTGAAGCTGAGCTACGACGGCCTGCTGGCGCGCGACCGCCGCGTGTTCGACTGGGCCTGGACGCGCCGGCTGCCGCTGACGCTGTGCATGGGCGGTGGCTATGGTCACGACATCGGCACCACCGTGCAGGTACAGGTCAACACCTTCGGCGTCGCCCTGCAGTACTGGCGCCGCTGGCAGAATGCCCGCCCATGA
PROTEIN sequence
Length: 295
MKTFYSTQLSLPLPPGHRFPMGKYAALRDRLAAECEGLRLAQAPPASDAELALAHAPAYVAAVAQGRLDARAQREIGFPWSEAMVERSRRSVGASIQATRVAQREGVAANLAGGTHHASAQAGXXXXXXXXXXXXXRIAVIDLDVHQGNGTASIFADDPSVFTLSLHGEKNFPFRKVAGDLDVGLPDGTGDQAYLDALDLALVELDSRFRPDAVFYLAGADPHEGDRLGRLKLSYDGLLARDRRVFDWAWTRRLPLTLCMGGGYGHDIGTTVQVQVNTFGVALQYWRRWQNARP*