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SCNpilot_bf_inoc_scaffold_1954_curated_9

Organism: scnpilot_dereplicated_Burkholderiales_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(9547..9810)

Top 3 Functional Annotations

Value Algorithm Source
Candidate ABC type branched chain amino acid transport systems, periplasmic component n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XX93_RAMTT similarity UNIREF
DB: UNIREF100
  • Identity: 72.1
  • Coverage: 86.0
  • Bit_score: 142
  • Evalue 2.40e-31
branched chain amino acid ABC transporter periplasmic protein; K01999 branched-chain amino acid transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 72.1
  • Coverage: 86.0
  • Bit_score: 142
  • Evalue 7.50e-32
Candidate ABC type branched chain amino acid transport systems, periplasmic component {ECO:0000313|EMBL:AEG93037.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.1
  • Coverage: 86.0
  • Bit_score: 142
  • Evalue 3.30e-31

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Taxonomy

Ramlibacter tataouinensis → Ramlibacter → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 264
ATGGAATGGAAGAAGCGCTACGACGCCAAGTTCCCCAACCAGTATCAGGTCTACAGCCCGTACACCTACGACGCGACGATGCTGCTGGCCGACGCCATGAAGCGTGCCGATTCGGTCGATCCCAAGGTCTACCTGCCCAAGCTGGCCGAATCCAGCTACAAGGGCATCACCTCGACCATCGCCTTCGAGCCGAACGGCGAAGTCAAGAACGCGGCCATCACCATTTCCACCTATCCGGGTGGCAAGAAGACGCCGCTGCAGTGA
PROTEIN sequence
Length: 88
MEWKKRYDAKFPNQYQVYSPYTYDATMLLADAMKRADSVDPKVYLPKLAESSYKGITSTIAFEPNGEVKNAAITISTYPGGKKTPLQ*