ggKbase home page

SCNpilot_bf_inoc_scaffold_883_curated_64

Organism: scnpilot_dereplicated_Burkholderiales_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(67179..69038)

Top 3 Functional Annotations

Value Algorithm Source
Membrane protein, putative n=1 Tax=Pseudomonas syringae pv. tomato (strain DC3000) RepID=Q87YR2_PSESM similarity UNIREF
DB: UNIREF100
  • Identity: 31.8
  • Coverage: 613.0
  • Bit_score: 276
  • Evalue 7.40e-71
membrane protein similarity KEGG
DB: KEGG
  • Identity: 31.8
  • Coverage: 613.0
  • Bit_score: 276
  • Evalue 2.30e-71
Membrane protein, putative {ECO:0000313|EMBL:AAO57199.1}; TaxID=223283 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas syringae pv. tomato (strain DC3000).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 31.8
  • Coverage: 613.0
  • Bit_score: 276
  • Evalue 1.00e-70

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas syringae group genomosp. 3 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1860
ATGCCGCGCGCTGACCCGTTGCGTCAGGGAGCACAAAAGTGGCTGCTGCGCGCCTGCGTGGCCCTGCCGTTGCTGATGCTGGGCGCCAACCTGCTGGCCTGGCTGCGCTGGGGCACCGACCTGCCCTACCTGGACGACTGGCGGGTCTACGACGAAGGCAGTGCCCTGTCACTGAACGTGCAACGGCTGTTTCGCGCCGTCAACAACACCATTTCACCGGTCGGCCTGGCGCTGGATGTGCTGGCGCAGCGCTGGCTGGGGGGCAATCCCTTGCCCTACCAGGCGCTGTCCATGGTGGCGGTGCTGGGCGGTCTGCTGTGGCTGCAATGGCGTCTGCTGGGTTGGGTGGTGGCAGACCGGCGCCAGCAGGTGCTGCTGTTCGCGCTGTGCTTTCCGATGCTGCAGTCAGGCAGCTACTGGGGTGAGCAGAACCTGGCGTATCACCAGGCGCTGCCGCTGCTGGCGCTGCTGGCGGCGGTCGGCTGGGCGCTGCGGCGGCCCGGGCGCTGGGCCCAGGCCGGTGTGCTGGCGCTGGGTCTGCTGGCCGGCCTGTCCTACATCTCGGGCGCCATCGCGGCCGTGGTGCTCGGTGCCTGCTGGCTGGTTCTGGGGTGGGTGCTGCACAGCCGGGCGGCGCCGGCGCTGGCCGCACGCCTGCGCCGCACGGGCGGCGTGCTGCTGCTGGCCGGCGGCCTGACCAGCGCGATGCAGATTTACCTGACGCGCGGGGACGTGCAGGCCAGGGACCGGCAGTACATGGGCCTGACGAGCCCCGTCACGTCCGATTTCTGGGCCTTCCTGGCCGCCAAGATCGGGCGCGCCAGCGGGCACGGTTTTGCGTCGCTGTCGCTGGAACTGGCCTGGGTGGCGCTGCTGGTGCTGGCGCTGGTCGCTGCCCTGGGGGTGGCGCTGCGCGGGCTGCTGGCGCGCGGTGGCGCCCATGCCCGACTGCGCCGCCTGGCGGTGGTGTTCGTGCCGCTGTGCGCCATCGTGCTGACCTACCTCGCGCTGGTGAGCCTGGGTCGAGCCGGGTTTCGAGATCCGGCCATCCAGGATGCCGGCGCGGTGTTCCGCTTTGGCTACGAGCGCTTTCACTTCTTCTGGGCCACCCTGCTGTTTCCCTGGGTCGCCGCGGCCCTCGCGCTGCGGGTTCGCTCGCGCGGGTGGGCCACGCCGGCCCTGGCTGGCGCGTTGCTGGTTCTGCTCGCGCTGTCGTCGGTGCGCGGCATGTTCGATGTGTCGTCGTTCTACCGCGCGGCGTCCGCCTATCGGGCGGGCGAGATTCGCTGCCTCGCCGGGCAGCTGGGATCCGGGCAGGCGATCCGCTGTCCGGGCTTCGACATGATGGGGATGAACGACCTGACGCGCGCCTATGTCCATGCGCGCGACATCAACGCCTCGTTCGTGCGCTACCTGCCCATACTGGCGCGCGAAGGCTTCGGGCGTGACCTGCTGCGCCGGGATGTGGCCGCTGGCGCCGAACCCGGCCCATGGACCCATGTGCGCCGTCTGCCCGATGGCTGGCTGCAGAGCGAAGGCGATGCGCAGTTGACGGTCGTGCTGCCGCAGGCCGAGCTGGCCCGGCGTTGCCGCATCATGGGCGTGCAGCTTGAGCTGGCGGTCCCGGGGGCGGAGACGGCGCAGATTTACTACCGATGGTCGGGTGAGGTGGCTGACAGCGAGACGCATTCGGTGCGCAAGGGCTACCAGCCCGACGCGGCTGGCCTCGCGCGGCTGGAATTCTCGCTCGACGCTCCCGCCGGCTTCGAGCCCCACCTGCGCATCGACCCCGTGGATGGCCTGTCCCGCTTCAGGCTGCGGGATCTGCGTGTCACCTGTCGCCTATGGGGGGATCGGTGA
PROTEIN sequence
Length: 620
MPRADPLRQGAQKWLLRACVALPLLMLGANLLAWLRWGTDLPYLDDWRVYDEGSALSLNVQRLFRAVNNTISPVGLALDVLAQRWLGGNPLPYQALSMVAVLGGLLWLQWRLLGWVVADRRQQVLLFALCFPMLQSGSYWGEQNLAYHQALPLLALLAAVGWALRRPGRWAQAGVLALGLLAGLSYISGAIAAVVLGACWLVLGWVLHSRAAPALAARLRRTGGVLLLAGGLTSAMQIYLTRGDVQARDRQYMGLTSPVTSDFWAFLAAKIGRASGHGFASLSLELAWVALLVLALVAALGVALRGLLARGGAHARLRRLAVVFVPLCAIVLTYLALVSLGRAGFRDPAIQDAGAVFRFGYERFHFFWATLLFPWVAAALALRVRSRGWATPALAGALLVLLALSSVRGMFDVSSFYRAASAYRAGEIRCLAGQLGSGQAIRCPGFDMMGMNDLTRAYVHARDINASFVRYLPILAREGFGRDLLRRDVAAGAEPGPWTHVRRLPDGWLQSEGDAQLTVVLPQAELARRCRIMGVQLELAVPGAETAQIYYRWSGEVADSETHSVRKGYQPDAAGLARLEFSLDAPAGFEPHLRIDPVDGLSRFRLRDLRVTCRLWGDR*