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SCNpilot_bf_inoc_scaffold_8750_curated_2

Organism: scnpilot_dereplicated_Burkholderiales_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 649..843

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.5
  • Coverage: 63.0
  • Bit_score: 115
  • Evalue 3.20e-23
tRNA pseudouridine synthase A (EC:5.4.99.12); K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] similarity KEGG
DB: KEGG
  • Identity: 73.4
  • Coverage: 64.0
  • Bit_score: 97
  • Evalue 1.20e-18
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00036453AF similarity UNIREF
DB: UNIREF100
  • Identity: 76.2
  • Coverage: 63.0
  • Bit_score: 101
  • Evalue 4.50e-19

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Taxonomy

Devosia sp. 17-2-E-8 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 195
ATGATCATCGTCACCGCCAAGGCGCGGAGCTTCCTCCACAGCCAGGTGCGCTCGATGGTCGGCTCGCTGAAGCTGGTGGGCGACGGCAAGTGGCGCCCAGGCGATTTTCGCGCCGCCCTCGATGCGCGCGATCGCGCCCGCTGCGGCCCGCTGGCCCCGCCCGACGGGCTGTACCTGACTAGGGTCGACTACTAG
PROTEIN sequence
Length: 65
MIIVTAKARSFLHSQVRSMVGSLKLVGDGKWRPGDFRAALDARDRARCGPLAPPDGLYLTRVDY*