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SCNpilot_bf_inoc_scaffold_717_curated_28

Organism: scnpilot_dereplicated_Burkholderiales_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 24346..25308

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter substrate-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI00035F9D9A similarity UNIREF
DB: UNIREF100
  • Identity: 70.8
  • Coverage: 315.0
  • Bit_score: 456
  • Evalue 2.70e-125
Uncharacterized protein {ECO:0000313|EMBL:EJL74524.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.1
  • Coverage: 324.0
  • Bit_score: 452
  • Evalue 5.50e-124
putative Bug-like extracytoplasmic solute binding receptor, TTT family similarity KEGG
DB: KEGG
  • Identity: 68.8
  • Coverage: 324.0
  • Bit_score: 445
  • Evalue 2.00e-122

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 963
TTGAATCGAAGAAACCTGTTGCTGACCGGCGCCGCCGCCGCCGTCGGCGCCCTGGCCGGCGGCGCGCGCGCCCAGAGCGACAACACGCTGCGCCTGATCGTCCCCTACGCCCCCGGCGGCTCCAGCGACCGCGCGGCGCGCATCGTGGCCGACAAGCTGACCGCCAGGCTGGGCGGGCCGGTGGTGGTCGAGAACAAGACCGGCGCCGGCGGCCGCCTGGCGATGCAGCAAACCAAGGGCCTGCCCGCCAGCCAGAACGTGCTGGTGCTGGCCAATCCGGCGACCATGGTGGTGGCGCCGCTGGTGTTCAAGGATAACGGCTACGACCCGGACAAGGATTTCCAGCCGGTGTCGCAGGTCAGCGACTACGAGTTCGGCGTCGCCGTCGCCACCGCCGTGCCGGTCAAGGAAATCAAGCACCTGCTGGCCTGGCTGCGCGCCAACCCCAACCAGGCCAACTTCGGTGTGCCGGCCACCGGCAGCCTGCCGCACTTCTTCGGCCTGATGACGGGCGAGAAGGCGCAGATCCCGGCCCAGGTGGTGGGCTACCGCGGCTCGGGCCCGCTGCTGACCGACCTCATCGGCGGCCAGGTGCCGGTGGCCTTCGACACCTTCGACACCCTGCTGCCGCAGCACGAGGCGGGCAAGCTGCGCATCCTGGCGTCTTCCGGCGCCAGGCGCTCGCCCTTCGCGCCCGACGTGCCGACCTTCAAGGAATCCGGCCTGGACCTGGCGGCCAGCGGCTGGAACGCCTTCTTCGCGCCGGCCAGCATGCCGGCCGACCGGGTGGCGCGCCTGGGCAGCGCCATCCGCGAAGTGATGCAGGAGGAGGACACGCGCCGCAAGTTTCTCGACGCCAGGATGGGGCCGGTAGCCAGCACGCCGGCACAGACCGCCGCCATGCTCAAGGCCTTCCGCGCGCAGTGGGCGCCGGTGGTGCAGAAGTCCGGCTATCAGCCCTGA
PROTEIN sequence
Length: 321
LNRRNLLLTGAAAAVGALAGGARAQSDNTLRLIVPYAPGGSSDRAARIVADKLTARLGGPVVVENKTGAGGRLAMQQTKGLPASQNVLVLANPATMVVAPLVFKDNGYDPDKDFQPVSQVSDYEFGVAVATAVPVKEIKHLLAWLRANPNQANFGVPATGSLPHFFGLMTGEKAQIPAQVVGYRGSGPLLTDLIGGQVPVAFDTFDTLLPQHEAGKLRILASSGARRSPFAPDVPTFKESGLDLAASGWNAFFAPASMPADRVARLGSAIREVMQEEDTRRKFLDARMGPVASTPAQTAAMLKAFRAQWAPVVQKSGYQP*