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SCNpilot_bf_inoc_scaffold_1101_curated_16

Organism: scnpilot_dereplicated_Burkholderiales_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(13443..15251)

Top 3 Functional Annotations

Value Algorithm Source
Elongation factor 4 {ECO:0000255|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000255|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000255|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000255|HAMAP-Rule:MF_00071}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.2
  • Coverage: 602.0
  • Bit_score: 1123
  • Evalue 0.0
Elongation factor 4 n=1 Tax=Acidovorax sp. (strain JS42) RepID=LEPA_ACISJ similarity UNIREF
DB: UNIREF100
  • Identity: 95.2
  • Coverage: 602.0
  • Bit_score: 1123
  • Evalue 0.0
  • rbh
GTP-binding protein LepA; K03596 GTP-binding protein LepA similarity KEGG
DB: KEGG
  • Identity: 95.2
  • Coverage: 602.0
  • Bit_score: 1123
  • Evalue 0.0

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Taxonomy

Acidovorax sp. JS42 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1809
ATGGACCACATCAGAAATTTTTCAATCATCGCGCACATCGACCACGGCAAATCCACGCTGGCCGATCGGCTGATCTCGCGTTGCGGCGGCCTGTCGGACCGCGAGATGAGCGAGCAGGTGCTCGACTCGATGGACATCGAGAAGGAGCGGGGGATAACCATCAAGGCGCAGACCGCCGCGCTGCAATACCAGGCGCGCGATGGCAAGGTCTACAACCTCAACCTGATCGACACGCCGGGACACGTGGACTTCTCCTACGAGGTGTCGCGCTCGCTGTCGGCCTGCGAGGGCGCATTGCTGGTGGTCGATGCCTCGCAGGGCGTGGAAGCGCAGACCGTGGCCAACTGCTACACCGCGCTGGAGCTCGGTGTCGAGGTGCTGCCGGTGCTCAACAAGATGGATTTGCCGCAGGCCGATCCGGACAACGCCAAGGCCGAGATTGAGGACGTGATTGGCATCGATGCGGGCGAAGCGATCGCCATCTCCGCCAAGACCGGCATGGGCATCGATGACGTGCTGGAGCAGGTGGTCGCCAAGGTGCCGCCACCGCGCGGCCAGGTGGCGGCACCGCTGCGCGCCATGATCATCGACTCGTGGTTCGACGCCTACGTGGGTGTGGTCATGCTGGTGCGGGTGGTCGATGGCCGGCTGTCCAAGGGTGAGCGCTTCAAGATGATGGCCACCGGCTCGGCCTACGAGGCCAACCAGCTGGGCGTCTTCACCCCGGCGCAGCAGCAGCGCGATGCGCTGGAGGCGGGCGAGGTGGGCTACATCATCGCCGGCATCAAGGAGCTGAAGGCCGCCAAGGTGGGTGACACCATCACGCTGGAGAAGAAGCTGCCCAACAACCTGGGACCGGCCAGCGAGGCGCTGCCCGGCTTCAAGGAAATCCAGCCGCAGGTGTTCGCCGGCCTGTACCCGACCGAAGCCAGCCAGTACGACCAGCTGCGCGACGCGCTGGAAAAGCTGCAACTCAACGACGCCTCGCTGCACTTCGAGCCCGAGGTTAGCCAGGCCCTGGGCTTCGGCTTTCGCTGTGGTTTTCTGGGCCTGCTGCACATGGAGATCGTGCAGGAGCGCCTGGAGCGCGAGTTCGACCAGGACCTGATCACCACCGCGCCCAGCGTGGTGTACGAGGTGGAGAAGGCCGACGGCGAGGTCGTCATGGTCGAGAACCCGTCCAAGATGCCTGATCAGGGCAAGATTCAGGAAATCCGCGAGCCCATCGTCACCGTGCACCTGTACATGCCGCAGGACTACGTGGGGCCCGTGATGACGCTGGCCAACCAGAAGCGTGGCGTGCAGCTGAACATGCAGTACCACGGGCGCCAGGTCATGCTGACCTATGAGCTGCCGCTGGGCGAGATCGTGCTGGACTTTTTCGACAAGCTCAAATCCGTCTCGCGCGGCTACGCGTCGATGGACTATGAGTTCAAGGAGTATCGGCCGTCCGACGTGGTCAAGGTCGACATCCTGCTCAACGGCGAGAAGGTCGATGCGCTGTCCATCATCGTGCACCGCAGCCAGTCGCAATACCGTGGTCGCGCGGTGGCGGCCAAGATGCGCGAGATCATCAGCCGCCAGCAATTCGACGTCGCCATCCAGGCGGCCATCGGCGCCAACATCATCGCGCGCGAGAACATCAAGGCGCTGCGCAAGAACGTGCTGGCAAAATGCTATGGGGGTGACATCACCCGCAAGCGCAAGCTATTGGAAAAACAGAAGGCGGGCAAGAAGCGGATGAAGCAGATCGGTTCCGTCGAGGTGCCGCAAGAGGCTTTCCTCGCCATCCTGCAGGTGGAAGACTGA
PROTEIN sequence
Length: 603
MDHIRNFSIIAHIDHGKSTLADRLISRCGGLSDREMSEQVLDSMDIEKERGITIKAQTAALQYQARDGKVYNLNLIDTPGHVDFSYEVSRSLSACEGALLVVDASQGVEAQTVANCYTALELGVEVLPVLNKMDLPQADPDNAKAEIEDVIGIDAGEAIAISAKTGMGIDDVLEQVVAKVPPPRGQVAAPLRAMIIDSWFDAYVGVVMLVRVVDGRLSKGERFKMMATGSAYEANQLGVFTPAQQQRDALEAGEVGYIIAGIKELKAAKVGDTITLEKKLPNNLGPASEALPGFKEIQPQVFAGLYPTEASQYDQLRDALEKLQLNDASLHFEPEVSQALGFGFRCGFLGLLHMEIVQERLEREFDQDLITTAPSVVYEVEKADGEVVMVENPSKMPDQGKIQEIREPIVTVHLYMPQDYVGPVMTLANQKRGVQLNMQYHGRQVMLTYELPLGEIVLDFFDKLKSVSRGYASMDYEFKEYRPSDVVKVDILLNGEKVDALSIIVHRSQSQYRGRAVAAKMREIISRQQFDVAIQAAIGANIIARENIKALRKNVLAKCYGGDITRKRKLLEKQKAGKKRMKQIGSVEVPQEAFLAILQVED*