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SCNpilot_bf_inoc_scaffold_35_curated_13

Organism: scnpilot_dereplicated_Chloroflexi_1

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 11533..12090

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EDE2_9CHLR similarity UNIREF
DB: UNIREF100
  • Identity: 50.8
  • Coverage: 189.0
  • Bit_score: 173
  • Evalue 1.60e-40
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:CCF82704.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.8
  • Coverage: 189.0
  • Bit_score: 173
  • Evalue 2.20e-40
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 47.8
  • Coverage: 182.0
  • Bit_score: 169
  • Evalue 1.20e-39

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Taxonomy

Nitrolancea hollandica → Nitrolancea → Sphaerobacterales → Sphaerobacteridae → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 558
ATGGATGAAGCACAAGCTGTCGCCCAACTCAAAGCGGGAGATATCGCTGGATTGCAAATGTTGGTGGAAACACACCAAGTCGAAGCCCTTCAAGCGGCATGTCTCATTACTGGGGACCGGGCTGCGGCAGAGGACGTTGTACAAGCTGCTTTTCTTCGAGCCTTTGAGAAGATTCGGGGTTTTGACGAGACGCGCCCATTCCGTCCCTGGTTCATTCGTATGGTGGTCAACGATTCAATAAAAGCTGCGATTCGGCAAAGCCGACAAATATCAATGAAAGACGATGGAGACGCGGATTACGAGGCGGTGCTGCAAAAATTGACTAACTATATTAGAGAACCTGAGGATGCTGTCGAGCAGAAGGAACTGGTAACAGAAATGCGACAGGCCATAGCCCGACTTTCACCATCCCAGAGGGCAGCAATAGTTTTACACTATTTTTTAAATATGAGCACAGCAGAATCAGCAGACCAGCTGAACTGTGCACCAGGAACACTCCGGTGGCATTTGAGCGTAGCTCGTGCAAGGCTGCGATCTCTGCTTACCTCATTTAAATGA
PROTEIN sequence
Length: 186
MDEAQAVAQLKAGDIAGLQMLVETHQVEALQAACLITGDRAAAEDVVQAAFLRAFEKIRGFDETRPFRPWFIRMVVNDSIKAAIRQSRQISMKDDGDADYEAVLQKLTNYIREPEDAVEQKELVTEMRQAIARLSPSQRAAIVLHYFLNMSTAESADQLNCAPGTLRWHLSVARARLRSLLTSFK*