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SCNpilot_bf_inoc_scaffold_244_curated

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Displaying items 91-120 of 189 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_244_curated_91
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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80788..81234
DNA (447bp) protein (149aa)
50S ribosomal protein L15 n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1Y1_FLAB3
50S ribosomal protein L15; K02876 large subunit ribosomal protein L15
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
SCNpilot_bf_inoc_scaffold_244_curated_92
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


81244..82623
DNA (1380bp) protein (460aa)
Protein translocase subunit SecY n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1Y0_FLAB3
Preprotein translocase secY subunit; K03076 preprotein translocase subunit SecY
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
SCNpilot_bf_inoc_scaffold_244_curated_93
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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82632..82847
DNA (216bp) protein (72aa)
Translation initiation factor IF-1 n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1X9_FLAB3
translation initiation factor 1; K02518 translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
SCNpilot_bf_inoc_scaffold_244_curated_94
Riemerella anatipestifer, Riemerella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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83048..83425
DNA (378bp) protein (126aa)
30S ribosomal protein S13 n=1 Tax=Riemerella columbina RepID=UPI000370AD81
30S ribosomal protein s13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1228997 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Riemerella.;" source="Riemerella anatipestifer RA-CH-1.;"
SCNpilot_bf_inoc_scaffold_244_curated_95
Chryseobacterium oranimense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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83441..83830
DNA (390bp) protein (130aa)
30S ribosomal protein S11 n=4 Tax=Elizabethkingia RepID=H0KS01_9FLAO
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1300143 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium oranimense G311.;"
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11
SCNpilot_bf_inoc_scaffold_244_curated_96
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


83923..84531
DNA (609bp) protein (203aa)
30S ribosomal protein S4 n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1X5_FLAB3
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
SCNpilot_bf_inoc_scaffold_244_curated_97
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

84566..85561
DNA (996bp) protein (332aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
DNA-directed RNA polymerase alpha subunit (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
DNA-directed RNA polymerase subunit alpha n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1X4_FLAB3
SCNpilot_bf_inoc_scaffold_244_curated_98
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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85568..86101
DNA (534bp) protein (178aa)
50S ribosomal protein L17 n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CQE1_9FLAO
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
50S ribosomal protein L17; K02879 large subunit ribosomal protein L17
SCNpilot_bf_inoc_scaffold_244_curated_99
unidentified eubacterium SCB49, Bacteroidetes, Bacteria

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86305..86787
DNA (483bp) protein (161aa)
Putative uncharacterized protein n=1 Tax=unidentified eubacterium SCB49 RepID=A6EML4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDM44880.1}; TaxID=50743 species="Bacteria; Bacteroidetes; environmental samples.;" source="unidentified eubacterium SCB49.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_244_curated_100
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(86858..87277)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VW67_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KIA89754.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_244_curated_101
Chryseobacterium soli, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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87649..88941
DNA (1293bp) protein (431aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=445961 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium soli.;"
eno; phosphopyruvate hydratase (EC:4.2.1.11); K01689 enolase [EC:4.2.1.11]
Enolase n=1 Tax=Chryseobacterium sp. CF314 RepID=J2TD59_9FLAO
SCNpilot_bf_inoc_scaffold_244_curated_102
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

89024..90310
DNA (1287bp) protein (429aa)
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369, ECO:0000256|RuleBase:RU003370}; EC=2.3.3.16 {ECO:0000256|RuleBase:RU003370};; TaxID=1216967 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535.;"
Citrate synthase; K01647 citrate synthase [EC:2.3.3.1]
Citrate synthase n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CVR4_ELIME
SCNpilot_bf_inoc_scaffold_244_curated_103
unknown

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comp(90286..90480)
DNA (195bp) protein (65aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_244_curated_104
Chryseobacterium formosense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

90561..93053
DNA (2493bp) protein (831aa)
bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase (EC:1.2.1.3); K02618 oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase [EC:3.7.1.16 1.17.1.7]
Phenylacetic acid degradation protein PaaN, ring-opening aldehyde dehydrogenase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1W8_FLAB3
Phenylacetic acid degradation protein PaaN {ECO:0000313|EMBL:KFE97827.1}; TaxID=236814 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium formosense.;"
SCNpilot_bf_inoc_scaffold_244_curated_105
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

93120..93812
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CPY8_ELIME
Uncharacterized protein {ECO:0000313|EMBL:EOR29246.1}; TaxID=1216967 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_244_curated_106
Chryseobacterium sp. StRB126, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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93850..94614
DNA (765bp) protein (255aa)
Methylglutaconyl-CoA hydratase n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CIV3_ELIME
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:BAP29801.1}; TaxID=878220 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. StRB126.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_244_curated_107
BJP_IG2102_Flavobacteriales_34_12, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(94642..95604)
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Flavobacterium sp. CF136 RepID=J3C1D1_9FLAO
hypothetical protein
Tax=BJP_IG2102_Flavobacteriales_34_12
SCNpilot_bf_inoc_scaffold_244_curated_108
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(95778..97529)
DNA (1752bp) protein (584aa)
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12); K01876 aspartyl-tRNA synthetase [EC:6.1.1.12]
Aspartate--tRNA ligase n=1 Tax=Bergeyella zoohelcum ATCC 43767 RepID=K1MPD5_9FLAO
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:KIC64586.1}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwanense.;"
SCNpilot_bf_inoc_scaffold_244_curated_109
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

97752..97976
DNA (225bp) protein (75aa)
Uncharacterized protein {ECO:0000313|EMBL:KEY18416.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
Putative uncharacterized protein id=3826342 bin=GWF2_Bacteroidetes_33_16 species=Sphingobacterium sp. genus=Sphingobacterium taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
SCNpilot_bf_inoc_scaffold_244_curated_110
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(98037..98633)
DNA (597bp) protein (199aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1W0_FLAB3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU08423.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
SCNpilot_bf_inoc_scaffold_244_curated_111
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(98850..99359)
DNA (510bp) protein (170aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1V8_FLAB3
Uncharacterized protein {ECO:0000313|EMBL:KIA89741.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_244_curated_112
Chryseobacterium piperi, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

99409..100368
DNA (960bp) protein (320aa)
Zn-dependent dipeptidase, microsomal dipeptidase n=2 Tax=Elizabethkingia anophelis RepID=L8K1I3_9FLAO
Peptidase {ECO:0000313|EMBL:KFF22649.1}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium piperi.;"
Zn-dependent dipeptidase, microsomal dipeptidase
SCNpilot_bf_inoc_scaffold_244_curated_113
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

100390..101496
DNA (1107bp) protein (369aa)
lipid-A-disaccharide synthase; K00748 lipid-A-disaccharide synthase [EC:2.4.1.182]
Lipid-A-disaccharide synthase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1V7_FLAB3
Lipid-A-disaccharide synthase {ECO:0000313|EMBL:KIA84286.1}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
SCNpilot_bf_inoc_scaffold_244_curated_114
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

101553..103331
DNA (1779bp) protein (593aa)
Competence protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1V6_FLAB3
Competence protein; K02238 competence protein ComEC
Competence protein {ECO:0000313|EMBL:ACU08419.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
SCNpilot_bf_inoc_scaffold_244_curated_115
Riemerella anatipestifer, Riemerella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

103447..104115
DNA (669bp) protein (223aa)
succinate dehydrogenase n=1 Tax=Riemerella columbina RepID=UPI000379E867
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFR35694.1}; TaxID=1228997 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Riemerella.;" source="Riemerella anatipestifer RA-CH-1.;"
SCNpilot_bf_inoc_scaffold_244_curated_116
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

104166..106178
DNA (2013bp) protein (671aa)
Succinate dehydrogenase {ECO:0000313|EMBL:KIA84284.1}; EC=1.3.5.1 {ECO:0000313|EMBL:KIA84284.1};; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.99.1); K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1]
Succinate dehydrogenase or fumarate reductase, flavoprotein subunit n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VYS9_9FLAO
SCNpilot_bf_inoc_scaffold_244_curated_117
Chryseobacterium piperi, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

106200..106967
DNA (768bp) protein (256aa)
succinate dehydrogenase/fumarate reductase iron-sulfur subunit (EC:1.3.99.1); K00240 succinate dehydrogenase iron-sulfur subunit [EC:1.3.99.1]
Succinate dehydrogenase iron-sulfur protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1V3_FLAB3
Fumarate reductase {ECO:0000313|EMBL:KFF29934.1}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium piperi.;"
SCNpilot_bf_inoc_scaffold_244_curated_118
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

107128..108627
DNA (1500bp) protein (500aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1V2_FLAB3
Thioredoxin {ECO:0000313|EMBL:KIA89733.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_244_curated_119
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

108702..109004
DNA (303bp) protein (101aa)
Uncharacterized protein {ECO:0000313|EMBL:KIA89732.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
SCNpilot_bf_inoc_scaffold_244_curated_120
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

109108..110517
DNA (1410bp) protein (470aa)
RNA methyltransferase, TrmA family; K03215 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
RNA methyltransferase, TrmA family n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1V1_FLAB3
RNA methyltransferase, TrmA family {ECO:0000313|EMBL:ACU08414.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
Displaying items 91-120 of 189 in total

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