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SCNpilot_bf_inoc_scaffold_61_curated

Search features with annotation key words

Displaying items 151-180 of 460 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_61_curated_151
Chryseobacterium haifense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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174043..175668
DNA (1626bp) protein (542aa)
60 kDa chaperonin n=1 Tax=Chryseobacterium haifense RepID=J9ZVC0_9FLAO
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=421525 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium haifense.;"
Heat shock protein 60 family chaperone GroEL; K04077 chaperonin GroEL
SCNpilot_bf_inoc_scaffold_61_curated_152
Chryseobacterium sp. StRB126, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

176322..176969
DNA (648bp) protein (216aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00180, ECO:0000256|SAAS:SAAS00038056}; Short=DHBP synthase {ECO:0000256|HAMAP-Rule:MF_00180};; EC=4.1.99.12 {ECO:0000256|HAMAP-Rule:MF_00180, ECO:0000256|SAAS:SAAS00037921};; TaxID=878220 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. StRB126.;"
3,4-dihydroxy-2-butanone 4-phosphate synthase n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CJ40_9FLAO
3,4-dihydroxy-2-butanone 4-phosphate synthase
SCNpilot_bf_inoc_scaffold_61_curated_153
unknown

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177178..177405
DNA (228bp) protein (76aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_61_curated_154
Chryseobacterium sp. P1-3, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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177417..177926
DNA (510bp) protein (170aa)
Ferritin {ECO:0000256|RuleBase:RU361145}; EC=1.16.3.2 {ECO:0000256|RuleBase:RU361145};; TaxID=1517683 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. P1-3.;"
ferritin; K02217 ferritin [EC:1.16.3.1]
Ferritin-like protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VU03_9FLAO
SCNpilot_bf_inoc_scaffold_61_curated_155
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

178230..179003
DNA (774bp) protein (258aa)
LuxR family transcriptional regulator n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CPY6_ELIME
LuxR family transcriptional regulator {ECO:0000313|EMBL:EOR31125.1}; TaxID=1216967 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535.;"
LuxR family transcriptional regulator
SCNpilot_bf_inoc_scaffold_61_curated_156
unknown

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179142..179792
DNA (651bp) protein (217aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_61_curated_157
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(179982..181412)
DNA (1431bp) protein (477aa)
Uncharacterized protein {ECO:0000313|EMBL:KEY18436.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
Spore coat assembly protein id=2983813 bin=GWF1_Spirochaetes_51_8 species=Spirochaeta africana genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_51_8 organism_group=Spirochaetes organism_desc=Novel clade
spore coat assembly protein
SCNpilot_bf_inoc_scaffold_61_curated_158
unknown

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comp(181824..181979)
DNA (156bp) protein (52aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_61_curated_159
unknown

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comp(182068..182211)
DNA (144bp) protein (48aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_61_curated_160
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


182274..185774
DNA (3501bp) protein (1167aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5); K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5]
Isoleucine--tRNA ligase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6WZX0_FLAB3
SCNpilot_bf_inoc_scaffold_61_curated_161
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

185846..186226
DNA (381bp) protein (127aa)
DnaK suppressor protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CGC9_9FLAO
Molecular chaperone DnaK {ECO:0000313|EMBL:KIA84436.1}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
DnaK suppressor protein
SCNpilot_bf_inoc_scaffold_61_curated_162
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

186314..186955
DNA (642bp) protein (214aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112508};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
lipoprotein signal peptidase (EC:3.4.23.36); K03101 signal peptidase II [EC:3.4.23.36]
Lipoprotein signal peptidase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6WZW6_FLAB3
SCNpilot_bf_inoc_scaffold_61_curated_163
Chryseobacterium soli, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

186972..187901
DNA (930bp) protein (310aa)
Glycosyltransferase, group 2 family protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VVS7_9FLAO
Capsular biosynthesis protein CpsI {ECO:0000313|EMBL:KFF13970.1}; TaxID=445961 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium soli.;"
glycosyl transferase family protein
SCNpilot_bf_inoc_scaffold_61_curated_164
Barnesiella viscericola, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

187943..189082
DNA (1140bp) protein (380aa)
hypothetical protein n=1 Tax=Prochlorococcus sp. W8 RepID=UPI00031826A7
Uncharacterized protein {ECO:0000313|EMBL:AHF13945.1}; TaxID=880074 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella viscericola DSM 18177.;"
SCNpilot_bf_inoc_scaffold_61_curated_165
Saccharicrinis fermentans, Saccharicrinis, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

189094..190101
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Flavobacterium sp. WG21 RepID=UPI0003654E36
Inner membrane protein YiaH {ECO:0000313|EMBL:GAF04942.1}; TaxID=869213 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Saccharicrinis.;" source="Saccharicrinis fermentans DSM 9555 = JCM 21142.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_61_curated_166
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(190165..190965)
DNA (801bp) protein (267aa)
Putative molybdopterin converting factor subunit 2 n=1 Tax=Acetobacter sp. CAG:267 RepID=R5XTL7_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KEY17790.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
UPF0249 protein EF_3048
SCNpilot_bf_inoc_scaffold_61_curated_167
unknown

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comp(190962..192332)
DNA (1371bp) protein (457aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_61_curated_168
Acetobacter sp. CAG:267, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(192325..193275)
DNA (951bp) protein (317aa)
Glycosyltransferase group 2 family protein n=1 Tax=Acetobacter sp. CAG:267 RepID=R5XZU7_9PROT
Glycosyltransferase group 2 family protein {ECO:0000313|EMBL:CDA18009.1}; TaxID=1262684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter; environmental samples.;" source="Acetobacter sp. CAG:267.;"
glycosyl transferase family 2
SCNpilot_bf_inoc_scaffold_61_curated_169
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(193282..194052)
DNA (771bp) protein (257aa)
Putative O-methyltransferase n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CAJ6_9FLAO
Methyltransferase {ECO:0000313|EMBL:KIC64982.1}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwanense.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_61_curated_170
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

194098..195372
DNA (1275bp) protein (425aa)
Glycosyltransferase, group 1 family protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VVR9_9FLAO
Glycosyl transferase family 1 {ECO:0000313|EMBL:KIA89940.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
glycosyl transferase, group 1 family protein
SCNpilot_bf_inoc_scaffold_61_curated_171
Chryseobacterium piperi, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

195369..195935
DNA (567bp) protein (189aa)
maa; maltose O-acetyltransferase (EC:2.3.1.79)
Uncharacterized protein n=1 Tax=Bergeyella zoohelcum ATCC 43767 RepID=K1LCS2_9FLAO
Capsule biosynthesis protein CapG {ECO:0000313|EMBL:KFF30274.1}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium piperi.;"
SCNpilot_bf_inoc_scaffold_61_curated_172
Riemerella anatipestifer, Riemerella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

196175..197335
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Riemerella anatipestifer RA-CH-1 RepID=J9QTB2_RIEAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFR35616.1}; TaxID=1228997 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Riemerella.;" source="Riemerella anatipestifer RA-CH-1.;"
SCNpilot_bf_inoc_scaffold_61_curated_173
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

197375..197929
DNA (555bp) protein (185aa)
Hexapeptide transferase family protein; K00640 serine O-acetyltransferase [EC:2.3.1.30]
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441};; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
Serine acetyltransferase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X2V9_FLAB3
SCNpilot_bf_inoc_scaffold_61_curated_174
Elizabethkingia anophelis, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

197934..198599
DNA (666bp) protein (222aa)
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=1338011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia anophelis NUHP1.;"
carbonate dehydratase n=1 Tax=Riemerella columbina RepID=UPI00036635B5
carbonate dehydratase
SCNpilot_bf_inoc_scaffold_61_curated_175
Chryseobacterium formosense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

198777..199025
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CAP5_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFE98665.1}; TaxID=236814 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium formosense.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_61_curated_176
Bergeyella zoohelcum, Bergeyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

199195..200781
DNA (1587bp) protein (529aa)
Uncharacterized protein n=1 Tax=Bergeyella zoohelcum CCUG 30536 RepID=K1MZ27_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EKB61339.1}; TaxID=883098 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Bergeyella.;" source="Bergeyella zoohelcum CCUG 30536.;"
sulfate permease
SCNpilot_bf_inoc_scaffold_61_curated_177
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

200876..201511
DNA (636bp) protein (212aa)
Carbonic anhydrase (EC:4.2.1.1); K01673 carbonic anhydrase [EC:4.2.1.1]
Carbonic anhydrase {ECO:0000313|EMBL:ACU08776.1}; EC=4.2.1.1 {ECO:0000313|EMBL:ACU08776.1};; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
Carbonic anhydrase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X2W3_FLAB3
SCNpilot_bf_inoc_scaffold_61_curated_178
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(201514..202077)
DNA (564bp) protein (188aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
peptidyl-tRNA hydrolase (EC:3.1.1.29); K01056 peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
Peptidyl-tRNA hydrolase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X2W4_FLAB3
SCNpilot_bf_inoc_scaffold_61_curated_179
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(202087..202917)
DNA (831bp) protein (277aa)
Uncharacterized protein {ECO:0000313|EMBL:KIA89946.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
SCNpilot_bf_inoc_scaffold_61_curated_180
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(202975..203778)
DNA (804bp) protein (268aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-]
Transcription-repair-coupling factor n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X2W6_FLAB3
Displaying items 151-180 of 460 in total

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