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SCNpilot_bf_inoc_scaffold_244_curated_185

Organism: scnpilot_dereplicated_Chryseobacterium_1

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38 MC: 1
Location: 174722..175468

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=236814 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium formosense.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.3
  • Coverage: 242.0
  • Bit_score: 405
  • Evalue 6.00e-110
truA; tRNA pseudouridine synthase A (EC:4.2.1.70); K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] similarity KEGG
DB: KEGG
  • Identity: 78.1
  • Coverage: 242.0
  • Bit_score: 386
  • Evalue 6.40e-105
tRNA pseudouridine synthase A n=1 Tax=Chryseobacterium sp. CF314 RepID=J2JIT1_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 80.2
  • Coverage: 242.0
  • Bit_score: 403
  • Evalue 2.10e-109

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Taxonomy

Chryseobacterium formosense → Chryseobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 747
ATGCGATATTGTATTGAATTTTCTTATCTAGGTAAAAACTATTTTGGTTATCAGATTCAGCCGAGGGAAATTACCGTTCAGCAGGAGTTGGAAACCGCACTTTCGACGATTCTTCGCGAAACCATTAAAACCACGGGCGCCGGCAGGACAGATACCGGTGTTCATGCCAAAAAAATGTTTGCTCATTTCGATACTGAAAAAATATTGAGTGATAATCTTGCCCATCAACTCAACAGTTTTTTGCCACCCGACATTGCGGTGAAGAGAATTTTTAGCGTTGCAGCGGATTTTCATGCAAGATTTGATGCTACTTTTCGCACGTACGAGTATTTCATTTCACTTGAGAAAAATCCTTTTACGCAAGATTCCGCCTGGTCGATCTGGAAAAGAAAATTGGATGTAGAGAAAATGAACAAAGCATGCAAGATTCTTTTGGAATACGGGGATTTCACCAGTTTTGCTAAACTCCACGCCGATAATAAAACCAATATCTGCAAAATTTATAAAGCAGGATGGGAGCAAAAAGGTAGCGAACTTAAATTCACTATTTCTGCAGACCGATTCCTTCGGAATATGGTGCGTGCAATTGTGGGAACCATGGTGGAAATTGGCAATGGGAAAATTCAACCCGATGATTTGCATACTATTATAGAATCTCGGAACCGGAACGTTGCTGGAACTTCCGCACCTGCACAAGGATTATTTTTGGTTGATGTGGGCTACGAGTCTCTGGAAATGGAGGAGTAA
PROTEIN sequence
Length: 249
MRYCIEFSYLGKNYFGYQIQPREITVQQELETALSTILRETIKTTGAGRTDTGVHAKKMFAHFDTEKILSDNLAHQLNSFLPPDIAVKRIFSVAADFHARFDATFRTYEYFISLEKNPFTQDSAWSIWKRKLDVEKMNKACKILLEYGDFTSFAKLHADNKTNICKIYKAGWEQKGSELKFTISADRFLRNMVRAIVGTMVEIGNGKIQPDDLHTIIESRNRNVAGTSAPAQGLFLVDVGYESLEMEE*