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SCNpilot_bf_inoc_scaffold_327_curated_72

Organism: scnpilot_dereplicated_Chryseobacterium_1

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38 MC: 1
Location: 75260..75772

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X2J7_FLAB3 similarity UNIREF
DB: UNIREF100
  • Identity: 79.9
  • Coverage: 169.0
  • Bit_score: 280
  • Evalue 8.30e-73
RNA polymerase {ECO:0000313|EMBL:KIA89704.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.9
  • Coverage: 169.0
  • Bit_score: 283
  • Evalue 2.40e-73
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 79.9
  • Coverage: 169.0
  • Bit_score: 280
  • Evalue 2.60e-73

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Taxonomy

Chryseobacterium jeonii → Chryseobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 513
ATGACTCACGAGATATTCAAAAACACGGTATTTTGTCTGAAGGACGAAATGTACCGATTTGCGAAACGATTCGTGATGAGCAGTGACGAAGCTGAAGATGTGGTGCAGGATCTGATGATTAAATTCTGGCAGAAAAAAGAGGAAATTGCCGGTTTTTCTAACCTTAAATCTTATGCACTAAAAGCGGTTAAGAACGAGTGCCTCAATAGATTAAAGCACCATGAAGTGAAGATGGGTTTTGCAGATTTCCAACTTCATCGTAGTGAGCATTACCATTGTGAGCCCAATAACCTTAAAGAACACATCATCAACTTCATTAATCAATTGCCTGAAAAGCAAAAAGCAGTAATTCACCTAAAAGATGTGGAAGAATATGAAGTTTCAGAAATTGGCGAAATGCTGGAGATGGAAGAAAACGCAGTACGCGTAAACCTCATGAGGGCCCGAACTAAAATTCGGCAACAAATACAGCAGCTGAACGACTTTGAAAACAAAATGATCGAAAATTCCTAA
PROTEIN sequence
Length: 171
MTHEIFKNTVFCLKDEMYRFAKRFVMSSDEAEDVVQDLMIKFWQKKEEIAGFSNLKSYALKAVKNECLNRLKHHEVKMGFADFQLHRSEHYHCEPNNLKEHIINFINQLPEKQKAVIHLKDVEEYEVSEIGEMLEMEENAVRVNLMRARTKIRQQIQQLNDFENKMIENS*