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SCNpilot_bf_inoc_scaffold_282_curated_47

Organism: scnpilot_dereplicated_Chryseobacterium_1

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38 MC: 1
Location: comp(64577..65152)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 region 2 n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VZL1_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 72.9
  • Coverage: 192.0
  • Bit_score: 294
  • Evalue 8.20e-77
ECF subfamily RNA polymerase sigma-24 subunit {ECO:0000313|EMBL:KIA90597.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.5
  • Coverage: 191.0
  • Bit_score: 309
  • Evalue 2.60e-81
RNA polymerase, sigma-24 subunit, ecf subfamily similarity KEGG
DB: KEGG
  • Identity: 51.3
  • Coverage: 191.0
  • Bit_score: 207
  • Evalue 4.10e-51

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Taxonomy

Chryseobacterium jeonii → Chryseobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 576
ATGGAGTTGGAAGTAACCTATATGCCGCAACATGAAAGAGAAAGTATAATTGCACAAACCGTAAAAAATTACGGTGGCAAGCTGATGTCTTTTATTCGCCCTAAAGTTAGAAATACAGAGGATGCGGAAGATATTTTGCAGGAAGTATGGTATCAGTTCAGTAATCTTACCAACATTGATGATATTGCTAATGTCGGTGGCTGGCTTTTTCGCGTGTCCAACAATAAAATTATCGATAAATACAGAAAGAAAACAACTGAAAATCTGGAGGACTTCGTTTACGAAGATGATGACGGTAGCTTTTCAATTAAGGATATCTTATTGCTGGACGATTCTGAAAACCCTGAACTTTTGCTGTTTCGGGATGAAGTTTGGAAACAACTTTTTACTGCATTGGAAGAGTTGCCCGAAAAGCAGCGAATTGCATTTGTGCATACCGAAATTGAAGGGAAAAAATTACAGGAAGTTGCTGATGAACAGGGAGAAAATATTAAAACCATTATCAGTAGAAAAAATTACGCCATGAAGCATTTGCGAAACAGAATGGCGGGTTTATATAAAGATTTGAAAGAATAA
PROTEIN sequence
Length: 192
MELEVTYMPQHERESIIAQTVKNYGGKLMSFIRPKVRNTEDAEDILQEVWYQFSNLTNIDDIANVGGWLFRVSNNKIIDKYRKKTTENLEDFVYEDDDGSFSIKDILLLDDSENPELLLFRDEVWKQLFTALEELPEKQRIAFVHTEIEGKKLQEVADEQGENIKTIISRKNYAMKHLRNRMAGLYKDLKE*