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SCNpilot_bf_inoc_scaffold_187_curated_18

Organism: scnpilot_dereplicated_Chryseobacterium_1

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38 MC: 1
Location: comp(17651..20548)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI00036920E2 similarity UNIREF
DB: UNIREF100
  • Identity: 56.6
  • Coverage: 977.0
  • Bit_score: 1162
  • Evalue 0.0
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:CDS96850.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.9
  • Coverage: 959.0
  • Bit_score: 1010
  • Evalue 1.20e-291
TonB-dependent outer membrane receptor similarity KEGG
DB: KEGG
  • Identity: 48.0
  • Coverage: 977.0
  • Bit_score: 971
  • Evalue 1.80e-280

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Taxonomy

Sphingobacterium sp. PM2-P1-29 → Sphingobacterium → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 2898
ATGAGAAAAACAAGTTTGAAAGTCTCCTGTCTCATTGCCGTTTTCTATTTTGGAAATGATGCAATGGCACAAAGAGCATCGAAAGACACTGTTGTCAAAGAACAGAGGATTGAAGAAGTGGTCATGATTGGCTATGGAAAGCAAAAGAGAGGTGATTTAACTTCTGCCATTGCTTCGGTGAAGGCCGAGGACATTACCAAACAACCATCGACAACCGCTATGCAGTCGCTACAAGGAAAACTTGGAGGTGTAACGATTGTAAACACCGACCAACCAGGAGCCACACCGAGTGTTATTATTCGGGGATTAGGAACGGCGTTGGCAGGAAGAGATCCTCTTTACGTGGTTGACGGTATGTTGGTGCCCAATATCACCAATATTAACCCACGAGATATCGAATCGATCGACGTTTTGAAAGATGCCGCATCCACCGCTATCTACGGAATTAGAGCAGCGAACGGTGTTGTAATTGTGACGACAAAAACCGGTAAAAGAGGAAAAACTAAAGTAACTTATGATGCTTATTACGGATTTAAAACGATCCTTAATAGAGTAGAGATGTTAGATGCTAGTCAATACGTTCAATACTTTAATGAAGAACGACTGGCCAACGGTAAAGATAAGTTTCTATCACCCAACCAGCAATACAACACCGACTGGTTAAAAGAAATTACCAGAACGGGTGTCGTTCAAGATAATAACGTTACCTTGAGTGGTGGTGGCGAAAACGTAACCTATTTCTTAGGAGTGGATCACTTTACAGAAGATGGCATTTTATCGGGACAGGACTATAGACGAACAACGATTAGAAATAATAATATCTATAAATTGTTTAATAATAAGGTACGTCTTTCTCAGAACGTAAGTTTCTCTAATACCAAGGAAAATATTAAACCTCTTGGTGCTTTTGATACCGCACACAGACAAGCTCCTGTTGTACCTGTAAAATATGATAATGGGAAATGGGGATTGCCATATTGGAATGAAAATACAGGGCAGACAACGTATCCGGGATCGCAGCTCAATTCTCATGGTAATCCGGTGGCAGCAATATATTTTGCGAATGAAGTGGCCAAAACGAATACGCTGCAAGCATTTCTGCAGGCAGATATAGATGTTTTTAAAGATCTTGTTTTTACTTCAAGAATTGGTACTACTAAATACTGGTATACAAAAGAAACCTTTTCTGCTACAAAAGAGCAATGGCTGGCAGGAAATCCAACAAGAACGGAAGCTGAATTTTTGGTACTGAGAAAAGCAAACCCCAAAAATACAAGTTATGCAGACAACTCATTTGCTTTAGAAAATATTGATACTTTCCGCTGGCAATGGGAGAACTATGCTACTTACAATAAAAAATTTGGCAACCATAGTCTGACCGTTGTAGCTGGGATGTCTGCCGAAGAAGTAGGTGTTGGTGGAAAGATGAGTGGTACAGCGTATAATGTTCCTTCCAAAAGCCAATATTGGAGTTTAGATAACAGTACATCGAGTGATCTGCTTAAGGAAGTAGGACAATTGTATTACACGCCCATACGATATGCCTCTTACTTTGGAAGAGTGCAATATGACTATGACAAAAGGTATTTTGTGTCCGGTATTGTACGGCGCGATGGTACCAGCAGATTCAAAAAAGACGCAATGTACTGGGATACTTTTCCATCCGTTAGTGCAGGGTGGAATATCTCTAATGAAGATTTCTTGAAAGGTAATTCAGTTATCAATTTCTTGAAACTTCGTGGAGGTTGGGGTACATTAGGAAATGATAATACCGGTGCTATCAATTATTCCTCTGTGAAATCTGGTGGAGGCAGTCAAAATTACAACTATGTTTTTGGTCCTGGACAGGATTTAATCTTCGGCGCTTATTATGGATCACCAGCTCTACCTTTAGGATGGGAAATCACTAAAGAGTGGAGTGTAGGATCTGATTTTACGTTACTCAATAATCGTCTATCAGGATCTTTTGATTATTACCAGAAGAAAAATACCAATACCATCCTAAAAATTAGACCTTTAGGAACAAGTCCTTACGATGAAGATTTTTTTGACCATGGTGGAGTAGTGATGAACAAGGGTTGGGAAGCCGCATTAAAATGGAAAGATTTTTCTGCTTCCGGAGATTTTTCTTACGATATAGGAGTTACGTTTAATAAGAATCACAACGAAGTTACAGAAGTTAAGCCAGCTTACGGAGGAATGACTGGAGGTTCTTTGGGAAATGGAAAAATCACCAAGAGACTCGAAGTAGGGCAACCGCTCGGGGCATGGTGGATGTACGAAGTTGAAGGGGTTTATCAAAATCAGGCGGAGATCAATAGTAGTGCAAATATCGCAGGTACTAAACCTGGATATTTGAGATATAAGGACCAAAATGGAGACGGCGTGATTGATGATAAAGATAAGGTGTTCATGGGAAGCTATCTGCCGACCTACAACTATAGTGTTCATGTTGGATTTAATTATAAGAGTATTGATTTCAGCATTGACGGATATGGCTCCGGAGGGAATAAAATATACAATGGGCTGAATAGTACACGTTTAGGAGGTGAAAACGTTTCCAAATACATGTTTGACAACCGATGGACAGGTGCGGGCTCTACCACCTCGGGTCCAGGTGCCCGCAGAGACGTTGAGGCATCCAATTACTATCTGGAAGATGGCGATTATTTTAGAATCAACAACATTACCTTAGGTTACAGCTTTAAAGATCAAATTGAAGGGCTACGTAATTTGAGATTATACGTCACCGCACAGAATCCGTTTATTTTCACCAAGTTCAAAGGATACAGTCCAGAATTAAATTCTGATGGAAATCCTTATGGAACTACAGGTGTTGAATTATCAGCTTATCCAAATTTGAAAAGCTTTATACTGGGTGTAAATGTTGAATTTTAA
PROTEIN sequence
Length: 966
MRKTSLKVSCLIAVFYFGNDAMAQRASKDTVVKEQRIEEVVMIGYGKQKRGDLTSAIASVKAEDITKQPSTTAMQSLQGKLGGVTIVNTDQPGATPSVIIRGLGTALAGRDPLYVVDGMLVPNITNINPRDIESIDVLKDAASTAIYGIRAANGVVIVTTKTGKRGKTKVTYDAYYGFKTILNRVEMLDASQYVQYFNEERLANGKDKFLSPNQQYNTDWLKEITRTGVVQDNNVTLSGGGENVTYFLGVDHFTEDGILSGQDYRRTTIRNNNIYKLFNNKVRLSQNVSFSNTKENIKPLGAFDTAHRQAPVVPVKYDNGKWGLPYWNENTGQTTYPGSQLNSHGNPVAAIYFANEVAKTNTLQAFLQADIDVFKDLVFTSRIGTTKYWYTKETFSATKEQWLAGNPTRTEAEFLVLRKANPKNTSYADNSFALENIDTFRWQWENYATYNKKFGNHSLTVVAGMSAEEVGVGGKMSGTAYNVPSKSQYWSLDNSTSSDLLKEVGQLYYTPIRYASYFGRVQYDYDKRYFVSGIVRRDGTSRFKKDAMYWDTFPSVSAGWNISNEDFLKGNSVINFLKLRGGWGTLGNDNTGAINYSSVKSGGGSQNYNYVFGPGQDLIFGAYYGSPALPLGWEITKEWSVGSDFTLLNNRLSGSFDYYQKKNTNTILKIRPLGTSPYDEDFFDHGGVVMNKGWEAALKWKDFSASGDFSYDIGVTFNKNHNEVTEVKPAYGGMTGGSLGNGKITKRLEVGQPLGAWWMYEVEGVYQNQAEINSSANIAGTKPGYLRYKDQNGDGVIDDKDKVFMGSYLPTYNYSVHVGFNYKSIDFSIDGYGSGGNKIYNGLNSTRLGGENVSKYMFDNRWTGAGSTTSGPGARRDVEASNYYLEDGDYFRINNITLGYSFKDQIEGLRNLRLYVTAQNPFIFTKFKGYSPELNSDGNPYGTTGVELSAYPNLKSFILGVNVEF*