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SCNpilot_bf_inoc_scaffold_151_curated

Search features with annotation key words

Displaying items 121-150 of 199 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_151_curated_121
Peptostreptococcaceae bacterium OBRC8, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(137181..137597)
DNA (417bp) protein (139aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Eubacteriaceae bacterium OBRC8 RepID=J6HN50_9FIRM
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EJU23803.1}; TaxID=796941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium OBRC8.;"
PAS domain-containing protein
SCNpilot_bf_inoc_scaffold_151_curated_122
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(137639..138511)
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Youngiibacter fragilis 232.1 RepID=V7I292_9CLOT
RNA 2'-O ribose methyltransferase substrate binding family protein {ECO:0000313|EMBL:KIE46668.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein; K03437 RNA methyltransferase, TrmH family
SCNpilot_bf_inoc_scaffold_151_curated_123
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

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138653..139861
DNA (1209bp) protein (403aa)
cystathionine beta-lyase (EC:4.4.1.8); K14155 cystathione beta-lyase [EC:4.4.1.8]
Cystathionine beta-lyase {ECO:0000313|EMBL:ADZ82211.1}; EC=4.4.1.8 {ECO:0000313|EMBL:ADZ82211.1};; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
Cystathionine beta-lyase n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JLC3_CELLD
SCNpilot_bf_inoc_scaffold_151_curated_124
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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139995..141227
DNA (1233bp) protein (411aa)
Serine/threonine transporter SstT n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7WIF1_DESOD
Serine/threonine transporter SstT {ECO:0000256|HAMAP-Rule:MF_01582, ECO:0000256|SAAS:SAAS00015301}; Na(+)/serine-threonine symporter {ECO:0000256|HAMAP-Rule:MF_01582}; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;"
Na+/serine symporter; K07862 serine/threonine transporter
SCNpilot_bf_inoc_scaffold_151_curated_125
Desulfotomaculum ruminis, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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141438..141884
DNA (447bp) protein (149aa)
Heat shock protein Hsp20 n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DV60_DESRL
heat shock protein Hsp20; K13993 HSP20 family protein
Heat shock protein Hsp20 {ECO:0000313|EMBL:AEG59126.1}; TaxID=696281 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 /; DL).;"
SCNpilot_bf_inoc_scaffold_151_curated_126
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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142035..143018
DNA (984bp) protein (328aa)
Putative uncharacterized protein id=3775079 bin=GWB1_Spirochaetes_59_5 species=Alkaliphilus metalliredigens genus=Alkaliphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
hypothetical protein
Tax=GWB1_Spirochaetes_59_5_curated
SCNpilot_bf_inoc_scaffold_151_curated_127
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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143265..145268
DNA (2004bp) protein (668aa)
Methyl-accepting chemotaxis protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CDB8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGG81238.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
methyl-accepting chemotaxis protein
SCNpilot_bf_inoc_scaffold_151_curated_128
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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145292..146035
DNA (744bp) protein (248aa)
Nitroreductase (EC:1.-.-.-)
Nitroreductase family protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5U4J6_9FIRM
Nitroreductase family protein {ECO:0000313|EMBL:CCZ64002.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
SCNpilot_bf_inoc_scaffold_151_curated_129
Eubacterium acidaminophilum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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146056..146382
DNA (327bp) protein (109aa)
4a-hydroxytetrahydrobiopterin dehydratase {ECO:0000256|SAAS:SAAS00118034}; EC=4.2.1.96 {ECO:0000256|SAAS:SAAS00118034};; TaxID=1731 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium acidaminophilum.;"
putative pterin-4-alpha-carbinolamine dehydratase (EC:4.2.1.96); K01724 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
Putative uncharacterized protein n=1 Tax=Eubacterium acidaminophilum RepID=Q8GCT0_EUBAC
SCNpilot_bf_inoc_scaffold_151_curated_130
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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146609..147979
DNA (1371bp) protein (457aa)
MATE efflux family protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TNX6_ALKMQ
MATE efflux family protein
MATE efflux family protein {ECO:0000313|EMBL:ABR47894.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (strain QYMF).;"
SCNpilot_bf_inoc_scaffold_151_curated_131
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

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comp(148109..148873)
DNA (765bp) protein (255aa)
Uncharacterized protein id=4390593 bin=GWF2_Clostridiales_38_85 species=Anaerofustis stercorihominis genus=Anaerofustis taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
hypothetical protein
Tax=GWF2_Clostridiales_38_85_curated
SCNpilot_bf_inoc_scaffold_151_curated_132
Anaerofustis stercorihominis, Anaerofustis, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(148870..149802)
DNA (933bp) protein (311aa)
ABC transporter, ATP-binding protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CBA4_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDS71551.1}; TaxID=445971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Anaerofustis.;" source="Anaerofustis stercorihominis DSM 17244.;"
ABC transporter ATP-binding protein; K01990 ABC-2 type transport system ATP-binding protein
SCNpilot_bf_inoc_scaffold_151_curated_133
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(149802..150011)
DNA (210bp) protein (70aa)
Uncharacterized protein id=4390591 bin=GWF2_Clostridiales_38_85 species=unknown genus=Anaerostipes taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
hypothetical protein
Tax=GWF2_Clostridiales_38_85_curated
SCNpilot_bf_inoc_scaffold_151_curated_134
Clostridium autoethanogenum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(150197..151312)
DNA (1116bp) protein (372aa)
Transcriptional regulator n=2 Tax=Clostridium RepID=D8GIG3_CLOLD
transcriptional regulator, XRE family
Transcriptional regulator, XRE family {ECO:0000313|EMBL:AGY76081.1}; TaxID=1341692 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium autoethanogenum DSM 10061.;"
SCNpilot_bf_inoc_scaffold_151_curated_135
GWB2_Clostridiales_37_7_curated, Clostridiales, Bacteria

Not on your lists

151596..152990
DNA (1395bp) protein (465aa)
S-layer domain protein id=2100232 bin=GWB2_Clostridiales_37_7 species=Clostridiaceae bacterium L21-TH-D2 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
putative S-layer protein
Tax=GWB2_Clostridiales_37_7_curated
SCNpilot_bf_inoc_scaffold_151_curated_136
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

153001..158118
DNA (5118bp) protein (1706aa)
Transcriptional regulator n=1 Tax=Clostridium papyrosolvens C7 RepID=U4R159_9CLOT
Transcriptional regulator {ECO:0000313|EMBL:EPR10395.1}; TaxID=1330534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens C7.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_151_curated_137
unknown

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158121..158438
DNA (318bp) protein (106aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_151_curated_138
unknown

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158435..159322
DNA (888bp) protein (296aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_151_curated_139
unknown

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159348..159707
DNA (360bp) protein (120aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_151_curated_140
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

159664..162105
DNA (2442bp) protein (814aa)
AAA-like domain protein {ECO:0000313|EMBL:KIE45215.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
SCNpilot_bf_inoc_scaffold_151_curated_141
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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162102..163223
DNA (1122bp) protein (374aa)
Peptidase, M23 family n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NZ13_9FIRM
Peptidase, M23 family {ECO:0000313|EMBL:EDM98662.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
peptidase M23
SCNpilot_bf_inoc_scaffold_151_curated_142
unknown

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163244..163486
DNA (243bp) protein (81aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_151_curated_143
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

163652..165766
DNA (2115bp) protein (705aa)
DNA topoisomerase; K03169 DNA topoisomerase III [EC:5.99.1.2]
DNA topoisomerase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QDX7_9CLOT
DNA topoisomerase {ECO:0000313|EMBL:EKY26156.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
SCNpilot_bf_inoc_scaffold_151_curated_144
unknown

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165836..166159
DNA (324bp) protein (108aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_151_curated_145
unknown

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166244..166960
DNA (717bp) protein (239aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_151_curated_146
unknown

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167062..167319
DNA (258bp) protein (86aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_151_curated_147
unknown

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167535..167852
DNA (318bp) protein (106aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_151_curated_148
unknown

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comp(167964..168359)
DNA (396bp) protein (132aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_151_curated_149
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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168531..169064
DNA (534bp) protein (178aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Fusobacterium nucleatum subsp. animalis 4_8 RepID=R9R933_FUSNU
Sigma-70, region 4 family protein {ECO:0000313|EMBL:AIY84266.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
sigma-70 family RNA polymerase sigma factor
SCNpilot_bf_inoc_scaffold_151_curated_150
Clostridium sp. K25, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

169055..169279
DNA (225bp) protein (75aa)
Conserved domain protein n=2 Tax=Clostridium botulinum RepID=C5VQ11_CLOBO
Uncharacterized protein {ECO:0000313|EMBL:KEI06548.1}; TaxID=1443109 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. K25.;"
UviB-like protein
Displaying items 121-150 of 199 in total

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