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SCNpilot_bf_inoc_scaffold_539_curated_30

Organism: scnpilot_dereplicated_Clostridiales_1

near complete RP 49 / 55 MC: 5 BSCG 51 / 51 MC: 4 ASCG 14 / 38 MC: 4
Location: 14625..15575

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.4
  • Coverage: 316.0
  • Bit_score: 460
  • Evalue 2.60e-126
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 73.1
  • Coverage: 316.0
  • Bit_score: 455
  • Evalue 1.40e-125
DNA-directed RNA polymerase subunit alpha n=2 Tax=Desulfotomaculum RepID=F6B5S1_DESCC similarity UNIREF
DB: UNIREF100
  • Identity: 73.1
  • Coverage: 316.0
  • Bit_score: 455
  • Evalue 4.60e-125

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Taxonomy

Caloranaerobacter azorensis → Caloranaerobacter → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 951
GTGATTGAAATAGAAAAACCAACCATTGAGTGCGTTGAAATGGGTAGCGATGGACGCTACGGTAAATTTGTAGTTGAACCACTTGAAAGAGGCTATGCAACCACACTAGGTAACAGTTTAAGACGTATTTTACTTTCTTCTTTGCCGGGAACTGCGGTTCGTTGGATTAAGATCGAGAACGTTCTTCATGAGTTCTCGACTATTCCAGGTGTAAAAGAGGATGTCATTGAAATCATCTTAAACCTGAAGGAATTGTTTGCTAAAATTCATTCAGACGAAGATGTTAAGATTTTAAGAATCGAAGCATCTGAAGCAGGAGAGATTACAGCTGGTGACATCATAGCGGATGCTGACGTAGAGATATTAAATACCGATCTTCACATTTGTACCCTCGAAGAAAACTCGAGAATTTACATGGAGATCGCACTTGGCCAAGGCCGTGGTTACGTCACAGCAGAAAACAACAAAGAAGCAGGTTTACCTATTGGTATTATTCCAGTTGACTCAATTTACACACCAGTAAGAAAAGTTAACTATGCAGTGGATAAAACAAGAGTCGGTAAAGTTGCAGATTACGATAGACTAGTTCTCGAAGTTTGGACTGATGGAACCATCAAGCCAGATGAAGCGACTTCTCTTGGTGCTAAAATTATGTCGGAGCATCTCAACCTCTTTATTGACATGACAGATAGCGTTAATGGCGTTGAAATCATGGTTGAAAAGGAAGAAGATATCAAGGAAAAAGTGCTTGAAATGACGATTGAAGAGTTAGATCTTTCAGTTCGCTCATACAATTGCTTAAAAAGAGCTGGTATCAACACGGTTGAAGAGTTAACAAACAGAAGCGAAGACGATATGATGAAAGTACGTAATCTAGGTAAAAAATCACTTGAAGAAGTGAAATTTAAGCTCGCTGAGCTTGATCTGGGCTTACGTTCTGAAGATGAGTAA
PROTEIN sequence
Length: 317
VIEIEKPTIECVEMGSDGRYGKFVVEPLERGYATTLGNSLRRILLSSLPGTAVRWIKIENVLHEFSTIPGVKEDVIEIILNLKELFAKIHSDEDVKILRIEASEAGEITAGDIIADADVEILNTDLHICTLEENSRIYMEIALGQGRGYVTAENNKEAGLPIGIIPVDSIYTPVRKVNYAVDKTRVGKVADYDRLVLEVWTDGTIKPDEATSLGAKIMSEHLNLFIDMTDSVNGVEIMVEKEEDIKEKVLEMTIEELDLSVRSYNCLKRAGINTVEELTNRSEDDMMKVRNLGKKSLEEVKFKLAELDLGLRSEDE*