ggKbase home page

SCNpilot_bf_inoc_scaffold_3897_curated_1

Organism: scnpilot_dereplicated_Clostridiales_1

near complete RP 49 / 55 MC: 5 BSCG 51 / 51 MC: 4 ASCG 14 / 38 MC: 4
Location: comp(605..2071)

Top 3 Functional Annotations

Value Algorithm Source
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.6
  • Coverage: 486.0
  • Bit_score: 760
  • Evalue 1.40e-216
lysS; lysyl-tRNA ligase LysS (EC:6.1.1.6) similarity KEGG
DB: KEGG
  • Identity: 70.2
  • Coverage: 487.0
  • Bit_score: 725
  • Evalue 1.50e-206
Lysine--tRNA ligase n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B3A9_CLOA9 similarity UNIREF
DB: UNIREF100
  • Identity: 70.2
  • Coverage: 487.0
  • Bit_score: 725
  • Evalue 4.80e-206

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium aceticum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1467
ATGGAGAATTTAAGTGAAGTTTTACAGGTTAGACGTGACAAGCTCGCACATTTAAGAGAAATAGGTCAGGATCCATTTAAGATAGAAAAGTATGAGCGAACAAACTTTACGACAGATATTTTAAATGATTTTGACGGTTATGAAGGTAAAGAGGTTAGAGTAGCTGGCCGTATCATGGCTAAGAGAGATATGGGTAAAGCTTCTTTTATAGATATTCAAGATAGTGAAGGTAAAATTCAATCCTATGTGAGAAAAGACGCAATTGGTGAAGAAGTCTACAATATATTTAAAACCTATGATATCGGTGACATCATTGGTTTATCTGGAACTGTATTTAGAACACAAAAGGAAGAAATATCAATCAAGGCAGACAGTGTTATTTTACTTTCAAAGTCTTTACAGGTGCTTCCTGAAAAATGGCATGGCCTAAAAGACCAAGAAATTAGATATAGACAAAGATACGTTGACTTGATCGTCAACCCAGAAGTAAAAGAAAAATTCTTAATGCGCTCAAAAATCATCAAAACAATGAAATCTTATTTTGATGAAGAGGGTTTCTTAGAGGTGGATACGCCAGTTTTAAGTACAATTGCTGGTGGCGCTTCAGCTAGACCGTTTATTACGCATCATAATACACTTGATATCGACATGTATATGCGTATTGCAAATGAACTCTACCTTAAAAGATTAATCGTTGGTGGCTTCGATAGAGTCTACGAGATGGGTAAAATGTTCCGTAATGAAGGAATGAGCATGAAGCATAATCCAGAATATACTGCGGTTGAGCTATATGCTGCGTACGAGGATTACGATTACATGATGCGTCTTACTGAAACCGTTGTTGCAAAATGCTGTGAAGCAGTACATGGTACTACAGAAATAGAATTCCAAGGCACAAAGTTAGACTTTACACCACCTTGGAGACGTGCTTCTATGCATGATCTTGTTGAGCAAAAGACGGGTGTTAATTTCTACGCGATTGAAACAGATGAAGAAGCTAAAAAAGTTGCAAAAGAAAAGTTACATTTAGAAGTAGAAAAACACTACACTAAGGGTCACTTGGTTAACCTTGCGTTTGAAGAGTTCTGTGAAAGCGACTTGGTTCAACCGACATTTGTTTTACACCATCCAGTAGAAGTATCGCCACTTGCTAAACGTAATCCAGATAATCCAGCGATTACGAACCGATTCGAGGCTTTCGTTAATACGTGGGAAATTGCTAACGCGTTCTCTGAGTTAAACGACCCTATCGATCAAAAACAAAGATTTGAAGATCAGTTGAAGCAACGTGAAGCTGGTGACGATGAAGCACACATGATGGATGATGACTTCGTAAATGCACTTGAAGTGGGTTTACCTCCAACAGGTGGTTTAGGTATAGGTGTAGACCGACTCATTATGCTTCTTACAGATAGTGTTTCAATTAGAGATGTTATTTTATTCCCGACTATGAAACCGATTAAGTAA
PROTEIN sequence
Length: 489
MENLSEVLQVRRDKLAHLREIGQDPFKIEKYERTNFTTDILNDFDGYEGKEVRVAGRIMAKRDMGKASFIDIQDSEGKIQSYVRKDAIGEEVYNIFKTYDIGDIIGLSGTVFRTQKEEISIKADSVILLSKSLQVLPEKWHGLKDQEIRYRQRYVDLIVNPEVKEKFLMRSKIIKTMKSYFDEEGFLEVDTPVLSTIAGGASARPFITHHNTLDIDMYMRIANELYLKRLIVGGFDRVYEMGKMFRNEGMSMKHNPEYTAVELYAAYEDYDYMMRLTETVVAKCCEAVHGTTEIEFQGTKLDFTPPWRRASMHDLVEQKTGVNFYAIETDEEAKKVAKEKLHLEVEKHYTKGHLVNLAFEEFCESDLVQPTFVLHHPVEVSPLAKRNPDNPAITNRFEAFVNTWEIANAFSELNDPIDQKQRFEDQLKQREAGDDEAHMMDDDFVNALEVGLPPTGGLGIGVDRLIMLLTDSVSIRDVILFPTMKPIK*