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SCNpilot_bf_inoc_scaffold_50_curated_121

Organism: scnpilot_dereplicated_Clostridiales_1

near complete RP 49 / 55 MC: 5 BSCG 51 / 51 MC: 4 ASCG 14 / 38 MC: 4
Location: 148945..150774

Top 3 Functional Annotations

Value Algorithm Source
Sigma54 specific transcriptional regulator, Fis family n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TX18_ALKMQ similarity UNIREF
DB: UNIREF100
  • Identity: 48.4
  • Coverage: 611.0
  • Bit_score: 549
  • Evalue 4.50e-153
Fis family transcriptional regulator {ECO:0000313|EMBL:KJF28841.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.4
  • Coverage: 616.0
  • Bit_score: 574
  • Evalue 1.80e-160
sigma-54 dependent trancsriptional regulator similarity KEGG
DB: KEGG
  • Identity: 48.4
  • Coverage: 611.0
  • Bit_score: 549
  • Evalue 1.40e-153

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Taxonomy

Clostridium aceticum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1830
TTGTCACTTAATAAAATTATTTCAAGTGTACAATTGATTTGTGATGCCATAGCAAGTGTGGTAAACATTGACGTTACCATCGTCGATGAGGACCGCATTAGACTGGCTGGAACTGGAAGGTATCAAAGTAGTATTGGCGAAGTGGTTAATGAACACTCTGCCTTTAGCTTTGCTTTGAGGGAAAGCATGGGATTTATCATAGAAAATCCAGGTGAGCATCAAGCGTGTTTGGACTGTAATTGCAAGGACAGGTGCAATGAACATGCTGAAGTGTGCTGTCCGATTCTACTAGGAGGTAAAACCATTGGCGTCATCGGACTGATTGCCTTTGAAGCATCCCAAAGACAGGCACTTATAAGCAATCAAGATAACCTGATGTCCTTTTTGACTCGAATGGCGGATTTGATTGCCACCAAGCTAAAAGAGTTTGAGAGTCATGAAGCGCTTGATTTAATGGCAAAGGAGCTCGAAGTTGTATTTGAAAGCATCGACACTGGTCTATTGGCATGTGACCGAACAGGTAATGTAATCAGGGTCAATCAAAAGCTTAAACGCATTTTTCATCAGGAATCAATTCTACAATTAAAAGACCTTTTCTACGAAAAGGATTTAAGTTATATATTAAAGCTACAGGGGAATAGTAAAAACCACTATGTTACCTTTAAAAACGGAAGCCAGGGCATCGTCGATGTGGCTTTAATCAAGATGCAGAGGGAAACCAAGGGCGTTCTACTGACGATTAAGACGCTTGAAGAGGTCATGAATACCGTCAATGATATGGTCTTAGATACACCGAGTACCGGATTTGATCAAATTATAGGTGATTCTGCCATGCTTTTAAGCTCTAAGGAACTTGCATTAAAAGTGGCATCAAGCACCTCAACCGTTCTCATTCTTGGTGAAAGTGGCACGGGTAAGGAGTTGTTCGCAAGAGCCATACATCATAGCAGTGATCGTAAGGATGGGCCATTTGTGGCGATTAATTGTGCGGCTATTCCGGACTATTTACTGGAGAGCGAGCTGTTTGGATACGATGAAGGGGCTTTTACAGGGGCAAAACGTGGAGGAAAACCAGGTAAATTTCAGTTAGCAAGTGGCGGTACCTTGTTTTTAGATGAAATTGGCGATATGCCACTACATCTGCAGGGAAAGCTCTTAAGAGCGCTTCAGGAGAAGGCCATCGACCGCCTTGGAGGTGCTACTGCAATTCCTGTGAATGTTCGGGTCATTGCTGCAACACATAGGGATTTAGAAGAAAAAGTTGAAGAGGGTGCCTTTAGGCAGGATCTTTATTATCGTCTTAATGTTATTCCAATTACACTACCGCCACTTAGAGATCGAAAGGATGATTTGATGCTCACTGCGCAGCATCTGGTTTCAAAATGGTGTACGCGTCTTTTAAAGCCAGTTCCACGACTTTCTGATGCCTTTAGAGGTGCAATACTCATTTACGATTGGCCGGGAAATGTCAGAGAGCTTGAAAATGCAATTGAGTATGCAATTAACGTATGTGATGGCAATCAGCTTGAATACTGGCATTTGCCAAAACGCATTATTGCAAAAATTGAACCGAAAGAGACTTTCGCAAAACAGGTGAAGCAGTCTTTAATTCAGCTGACACAGGATCAGACGCTACCTCCGATACACGAGCATGAACAAAAAGAGGAACGGATTGTAGCCTTAGAGATTATGGAAAAGCGACTTATTCAAGCGGCACTACTGAAATTTGGCGATTCGGGAGATGGTATCGCTCAGGCAGCACAAGCCCTCGGCATCAGTCGAGCGACACTTTATAGAAAAATCAAAGCATTTGAGGATTTAAAGGAATAG
PROTEIN sequence
Length: 610
LSLNKIISSVQLICDAIASVVNIDVTIVDEDRIRLAGTGRYQSSIGEVVNEHSAFSFALRESMGFIIENPGEHQACLDCNCKDRCNEHAEVCCPILLGGKTIGVIGLIAFEASQRQALISNQDNLMSFLTRMADLIATKLKEFESHEALDLMAKELEVVFESIDTGLLACDRTGNVIRVNQKLKRIFHQESILQLKDLFYEKDLSYILKLQGNSKNHYVTFKNGSQGIVDVALIKMQRETKGVLLTIKTLEEVMNTVNDMVLDTPSTGFDQIIGDSAMLLSSKELALKVASSTSTVLILGESGTGKELFARAIHHSSDRKDGPFVAINCAAIPDYLLESELFGYDEGAFTGAKRGGKPGKFQLASGGTLFLDEIGDMPLHLQGKLLRALQEKAIDRLGGATAIPVNVRVIAATHRDLEEKVEEGAFRQDLYYRLNVIPITLPPLRDRKDDLMLTAQHLVSKWCTRLLKPVPRLSDAFRGAILIYDWPGNVRELENAIEYAINVCDGNQLEYWHLPKRIIAKIEPKETFAKQVKQSLIQLTQDQTLPPIHEHEQKEERIVALEIMEKRLIQAALLKFGDSGDGIAQAAQALGISRATLYRKIKAFEDLKE*