ggKbase home page

SCNpilot_bf_inoc_scaffold_307_curated_23

Organism: scnpilot_dereplicated_Rhodanobacter_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 32909..35953

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.3
  • Coverage: 999.99
  • Bit_score: 1189
  • Evalue 0.0
Ribonuclease E n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WI69_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 65.8
  • Coverage: 999.99
  • Bit_score: 1175
  • Evalue 0.0
ribonuclease, Rne/Rng family similarity KEGG
DB: KEGG
  • Identity: 65.0
  • Coverage: 999.99
  • Bit_score: 1167
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Dyella jiangningensis → Dyella → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3045
ATGAAGCGCATGTTGATCAACGCAACTCAGCGTGAAGAGTTGCGTGTGGCCATCGTCGATGGCCAGAACCTCTACGATCTCGATATCGAAATCCCCTCCCGCGAACAGAAAAAGGCCAATATCTACAAGGGCCGCATCACCCGCGTCGAGCAATCCCTGGAAGCCTGCTTCGTCGATTACGGCGCCGAACGCCACGGCTTCCTGCCGCTGAAGGAAATCGCCGACCAGTACTTCACCCCCGGACTGAACCCGCACAAGTCGGGCATCCGCGAGCTGCTGAAGGAAGGCCAGGAAGTCGTCGTCCAGGTCGAGAAGGAAGAGCGCGGCAACAAGGGCGCCGCCCTGACCACCTTCATCTCGCTGGCCGGCCGCTACATGGTGCTGATGCCGAACAACCCGAAGGCCGGCGGCGTCTCGCGCCGGATCGAGGGCGAGGACCGGCAGGCGCTGAAGGAAGCCCTGGAGCACGTCACCGTGCCCGACGACGTGGGCCTGATCGTGCGCACCGCCGGCCTCGGCCGCGACGCCGAAGAGCTGCAGTGGGACCTGGACTACCTGCTGACCCTGTGGCGCTCGATCTCCGACGCCGCCAGCAAGCGCAAGGCGCCGTTCCTGATCTACCAGGAATCCAAGCTGTTCATCCGCGCCCTGCGCGACTACCTGCGCAGCGACATCGGCGAGATCCTGATCGACGAGGAAGCGCTGTACGAGGACGCGCGCGAGTTCATGCAGCAGGTGATGCCGACCTCGCTGCGCAAGCTCAAGCTGTACAAGGACGACACCCCGCTGTTCAGCCGCTACCAGATCGAGACCCAGATCGAGAGCGCGTTCGACCGCCAGGTGCGCCTGCCCTCCGGCGGCTCGATCGTGATCGACCAGACCGAGGCGCTCACCGCCATCGACATCAACTCGGCCAAGGCCACCAAGGGCTCGGACATCGAGGAGACGGCGTTCAACACCAACCTCGAAGCCGCGGTGGAGATCGCCCGCCAGTGTCGCATCCGCGACGCCGGCGGCCTGATCGTGATCGACTTCATCGACATGGACAGCCCGCGCCACCAGCGCGAAGTCGAGGAAAAGCTCAAGGACGCGCTCAAGCTCGACCGCGCCCGCGTGCAGGTGGGCCGCATCAGCCGCTTCGGCCTGCTGGAGCTGTCGCGCCAGCGCCTGCGCCCCAGCCTCGGCGAAGCCACCCAGATCGTCTGCCCGCGTTGCGAAGGCCACGGCCACATCCGCAGCGTGGAATCGTTGGGCCTGTCCACCCTGCGCCTGATAGAAGAGCACGCGATGAAGGACAACACCGGCCAGGTGCTGGTGCAGGCCCCGCCGACGGTGGCGAACTTCCTGCTCAACGAGAAGCGCGCCAGCGTGGTCGAGATCGAGCTGCGCCACAAGGCGCACGTGGTGATCGTGGCCGACGACAAGCTGGAAACGCCGCACATCGAGATCCAGCGGATCAAGGAAGCGGACATGGGCGAGCACAGCAAGCCCAGCTACGAGCGCCTCACCGCGGTCGACGCCACGCCGATCCCGAAGATGGGCCAGGCGCTGGGCAGCAACGAGCAGCCCGCGGTCAGCGGCATCGTGCCCGCCACGCCCGCCCCGGTGCGCGAGGAGGCGCCCGCGCCGGCTCCTGTTCCGCAGCCGGCGCAGGCACGCCGTCCGGCGGCGCCCGCGCCGGTCGCTCCGCCTGCCCCCGGCGGCGGCATCATCTCGCGGCTGTTCGGCTGGTTCCGCACCAGCGCCGCCGCTCCGGCTGCAGCGCCCGCGGCGGCCCCGGCCAGCAGCAATGGCAGCGGCAGCAGCAATGCGCGCGGCAATCGCCAGCAGCAACAGCCGCGTCGCGACGAGCGCAACCGCAACGCGCAGGGCGGCAACGGCAACGGCAACCGCCAGCGCCGCGACGGCTCCGCGTCGGGCAAGTCGAACCAGCCGCAGAACGCCCAGCAGTCGAACCGCGGCAACCGCCAGCAGGGCGGCGAGAACGCCTCGCGCCAGCAGCAACCGCAGGCGAACGCCCAGGCACCCAGGCAGGAACGCCAGCAGCAGCCACGCAACAACGCCGCCGACGGCAAGCCCGCCCAGCAGCAGGAACGTGCCGAGCGCAAGGTCGCTGCCGCCACCGCGGTAGCCGCCGTCGCGGTCGCGAAACCGGAAGCGCCCAGCCCGCAGCCTGCAGTCGCCGCCGTTGAATCGGCGCCCGACGAGGTCAAGCTGATCGCCGCACCGGTCGCGGCCGGCGAGGAAGCCGGCGACGCCGCACCCGCGGATGCCGAGAATCCCTCGCGCCGCCGCCGTGGCCGCCGCGGTGGCCGCCGTCGTCGCCGCCATGAGGACGGCGCCGTCGGCGCGACGCCGGAGGCCGGTCAGCTCAGCGAACTCGACGACGAGGATCGCGACGAGTCGGAAACCGGGAGCGAGGAAGCCAGGCCCGCAGTTGCGGCCACCGCAGCCGTCATCCCCACGCCGGTGGTTGCCGACGCGGAGGCTGGCGAGACCGCTGCCGTGCAAACGGCCGCCGCGCCCGAACCCGTTGCGCCGCGCCCCGCTCCCGCACCGCGCACCCAGCCGGTGCAGGTGGAGCGCCACGAGCCTGTGCGCGTGGTGCTGACCGAAGCGCCGCTGGCCGCCGCCGTCGCCACCGCCTTCAGCCTGCCCCCGTTGCCGCCGATTCCGGAGAAGTCCGCACCGGCCGCCGCTGCGGCGACGGATACGGCGCACCCGGTCCAGACGGATGTTTCCGCCCCCGATCCGGTGGATCAGGCGGTCGCCTCGCCAGCCCCGGCTGATGTCGTGGAAACCCGGGAAGCTGCAGCCGAGCCAGTGGCCCCGGCGCCTCTCGCCGAGGTCCGGGAAGAGCCGGCGCATGCAGCCGTCAACGGCCATGCAGCGCCCGCGCCCGCCGTCGTGGTGCAGCCGCGGCAGGGCGACCTGCTCGGTCATTCCGCGGTCGAAGATGTACCTGCCGCCGAAGCGGAACCTGCGCCTGCACCCGATGCGTCCGCAGAAACCGCCGACGAGCACCGCAAGGACGCCGCGCTCTGA
PROTEIN sequence
Length: 1015
MKRMLINATQREELRVAIVDGQNLYDLDIEIPSREQKKANIYKGRITRVEQSLEACFVDYGAERHGFLPLKEIADQYFTPGLNPHKSGIRELLKEGQEVVVQVEKEERGNKGAALTTFISLAGRYMVLMPNNPKAGGVSRRIEGEDRQALKEALEHVTVPDDVGLIVRTAGLGRDAEELQWDLDYLLTLWRSISDAASKRKAPFLIYQESKLFIRALRDYLRSDIGEILIDEEALYEDAREFMQQVMPTSLRKLKLYKDDTPLFSRYQIETQIESAFDRQVRLPSGGSIVIDQTEALTAIDINSAKATKGSDIEETAFNTNLEAAVEIARQCRIRDAGGLIVIDFIDMDSPRHQREVEEKLKDALKLDRARVQVGRISRFGLLELSRQRLRPSLGEATQIVCPRCEGHGHIRSVESLGLSTLRLIEEHAMKDNTGQVLVQAPPTVANFLLNEKRASVVEIELRHKAHVVIVADDKLETPHIEIQRIKEADMGEHSKPSYERLTAVDATPIPKMGQALGSNEQPAVSGIVPATPAPVREEAPAPAPVPQPAQARRPAAPAPVAPPAPGGGIISRLFGWFRTSAAAPAAAPAAAPASSNGSGSSNARGNRQQQQPRRDERNRNAQGGNGNGNRQRRDGSASGKSNQPQNAQQSNRGNRQQGGENASRQQQPQANAQAPRQERQQQPRNNAADGKPAQQQERAERKVAAATAVAAVAVAKPEAPSPQPAVAAVESAPDEVKLIAAPVAAGEEAGDAAPADAENPSRRRRGRRGGRRRRRHEDGAVGATPEAGQLSELDDEDRDESETGSEEARPAVAATAAVIPTPVVADAEAGETAAVQTAAAPEPVAPRPAPAPRTQPVQVERHEPVRVVLTEAPLAAAVATAFSLPPLPPIPEKSAPAAAAATDTAHPVQTDVSAPDPVDQAVASPAPADVVETREAAAEPVAPAPLAEVREEPAHAAVNGHAAPAPAVVVQPRQGDLLGHSAVEDVPAAEAEPAPAPDASAETADEHRKDAAL*