ggKbase home page

SCNpilot_bf_inoc_scaffold_85_curated_3

Organism: scnpilot_dereplicated_Rhodanobacter_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 3328..3915

Top 3 Functional Annotations

Value Algorithm Source
Two-component system regulatory protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2S0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 63.6
  • Coverage: 195.0
  • Bit_score: 248
  • Evalue 6.80e-63
Transcriptional regulator {ECO:0000313|EMBL:EYR67012.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.6
  • Coverage: 195.0
  • Bit_score: 249
  • Evalue 4.30e-63
two-component system regulatory protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 59.4
  • Coverage: 192.0
  • Bit_score: 223
  • Evalue 5.70e-56

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lysobacter capsici → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 588
ATGGACGATACCCTCGACGCCTGGTTCATCCGCGAGATCGTGGTGCACGAAGCCGCCCTGACGCGGTTGTTGCAGCGCATCTGCCTGCAGCGCGACGACGTCCACGACCTGCGCCAGGAAGTCTATGTGCGCGTCTACGAGGCAGCGGGCAAGAACCTGCCGACGCAGCCCAAGGCCTTCCTGTTCTCCACCGCACGCCATCTGGTCACCGATCGGCTGCGTCGCAGCCGCGTGGTGGCCATCGACGCCGTGGGGGATATCGACGCCCTGAACGTCTTGATCGATGAGATCTCGCCGGAGCGCCGGCTGGACGGGCGGCAGATCCTCAAACGGCTTGCCGATGCCTTCGACCAGTTGCCGGCGCGCTGTCGCGAGGTGGTCTGGATGCGCAAGGTGCAGGAACTGCCGCAGAAGGTCGTGGCCGAACAACTCAGAATTACCGAGAAAACGGTGGAGAAACAGGTCGCCAAGGGAGTCAGGCTGATCGCCGACCACTTCTACGGCGAGGGTGTCGGCCACCGCGCTGCGCCGCAGCAACATGCCTCATTGCCGAACGAAGCAGTCCATGGTCAGCAGCCGACAGATTGA
PROTEIN sequence
Length: 196
MDDTLDAWFIREIVVHEAALTRLLQRICLQRDDVHDLRQEVYVRVYEAAGKNLPTQPKAFLFSTARHLVTDRLRRSRVVAIDAVGDIDALNVLIDEISPERRLDGRQILKRLADAFDQLPARCREVVWMRKVQELPQKVVAEQLRITEKTVEKQVAKGVRLIADHFYGEGVGHRAAPQQHASLPNEAVHGQQPTD*