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SCNpilot_bf_inoc_scaffold_64_curated_3

Organism: scnpilot_dereplicated_Rhodanobacter_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 2275..3054

Top 3 Functional Annotations

Value Algorithm Source
Inner membrane transport permease n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WHB1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 89.1
  • Coverage: 258.0
  • Bit_score: 458
  • Evalue 4.40e-126
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.1
  • Coverage: 258.0
  • Bit_score: 458
  • Evalue 6.20e-126
ABC-type polysaccharide/polyol phosphate export systems, permease component similarity KEGG
DB: KEGG
  • Identity: 89.1
  • Coverage: 257.0
  • Bit_score: 455
  • Evalue 9.00e-126

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 780
ATGAGCAACGCCGCGGCGAACCTGGTCGCCCTCAACACCCTGGTGCGCCGGGAGATCGTGCGCATCCTGCGCATCTGGACGCAGACGCTGATCCCGCCCGCGATCACCATGACGCTGTACTTCGTGATCTTCGGCAAGCTGATCGGCAGCCGCATCGGCGTCATGCACGGCGGCTTCAGCTACATGCAATACCTGGCGCCGGGGCTGGTGATGATGAGCATCATCACGAACAGCTACGGCAACATCTCCAGCTCGTTCTTCGGCGCGAAATTCAGCCGCGCGGTGGAAGAGATGCTGGTGTCGCCGATGCCGGACTGGGTGATCCTCACCGGCTACGTGGCCGGCGCGGTGGCGCGCGGCGTCGTGGTGGGCATGCTGGTGCTGGGCATCGCGCTGTTCTTCACCTCGCTGCACATCGCGCACCCGCTGATCACCCTGGCCGCGGTGCTGCTGGGCTCGGTGATCTTCTCGCTGGCCGGCTTCGTCAACGCGGTGTACGCGAAGAAGTTCGACGACATCGCGCTGGTGCCCACCTTCATCCTCACCCCGCTCACCTACCTCGGCGGCGTGTTCTACTCGATCGAGATGCTGGGCGAGCCGTGGCAGACGATCTCGCGCATCAACCCCATCCTGTACATGGTCAACGCGTTCCGCTACGGCGTGCTGGGCGTCAGCGACGTGCACGTGGGCTGGGCCTTCGTGGTGATGCTGGTCTTCGTGGTCGCGCTCAGCGCATTCGGCCTGCAACTGCTGAAGCGCGGCGTCGGGCTACGGTCTTGA
PROTEIN sequence
Length: 260
MSNAAANLVALNTLVRREIVRILRIWTQTLIPPAITMTLYFVIFGKLIGSRIGVMHGGFSYMQYLAPGLVMMSIITNSYGNISSSFFGAKFSRAVEEMLVSPMPDWVILTGYVAGAVARGVVVGMLVLGIALFFTSLHIAHPLITLAAVLLGSVIFSLAGFVNAVYAKKFDDIALVPTFILTPLTYLGGVFYSIEMLGEPWQTISRINPILYMVNAFRYGVLGVSDVHVGWAFVVMLVFVVALSAFGLQLLKRGVGLRS*