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SCNpilot_bf_inoc_scaffold_31_curated_27

Organism: scnpilot_dereplicated_Solirubrobacterales_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 25438..25995

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase n=1 Tax=Patulibacter americanus RepID=UPI0003B3CB95 similarity UNIREF
DB: UNIREF100
  • Identity: 46.6
  • Coverage: 176.0
  • Bit_score: 141
  • Evalue 8.60e-31
Putative RNA polymerase ECF-subfamily sigma factor {ECO:0000313|EMBL:EHN12047.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.3
  • Coverage: 178.0
  • Bit_score: 122
  • Evalue 7.50e-25
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 42.1
  • Coverage: 178.0
  • Bit_score: 117
  • Evalue 4.20e-24

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Taxonomy

Patulibacter medicamentivorans → Patulibacter → Solirubrobacterales → Thermoleophilia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 558
ATGGATTCCGACGAAGAGCTGATCGTCAGGTCGCGCCGCGACCCTGAAGCCTTCCGGGCTCTCTACGACCGCTGGTCGAAGCCGCTGTTGGCCTTCTTCTACCGCCGCACCTTCGATCCGGAGGTCTCAGCCGACCTGTTGGCCGAGACCTTCGCGGTAGCTTTCGAGCGGCGCCGCCGGTTCCGGCGAATCGGCCGTTCGGGCGCCGGCTGGCTATTCGGGATCGCCCGTCGCGAGCTTTCGCATTGGTACCGGCACCAGGAGGTCGAGCTGCGAGCGGTCCGCCGGCTCGGACTCGAAGTGCCCGAGCTGGACGACGACTCGATCGCACGAATCGAGTCTCTGGACGAAGTCGAATCTCTCCGAGCCTCTCTGGCCGATGCCCTGAAAGGGCTCTCCGTCACCGAACGGCAGGCGGTCGAACTCCGCGTGGTCGACGAGCTCGACTACGGCGAGATCGCCACCCGGCTCGACTGCAGCGAGGCCACGGCCCGCCAGAGGGTCCACCGCGGGCTGAAGCGCCTAAACCATCTGATGACCAAGGAAGCAACGCTATGA
PROTEIN sequence
Length: 186
MDSDEELIVRSRRDPEAFRALYDRWSKPLLAFFYRRTFDPEVSADLLAETFAVAFERRRRFRRIGRSGAGWLFGIARRELSHWYRHQEVELRAVRRLGLEVPELDDDSIARIESLDEVESLRASLADALKGLSVTERQAVELRVVDELDYGEIATRLDCSEATARQRVHRGLKRLNHLMTKEATL*