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SCNpilot_bf_inoc_scaffold_2844_curated_16

Organism: scnpilot_dereplicated_Solirubrobacterales_2

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 11178..11669

Top 3 Functional Annotations

Value Algorithm Source
transcription elongation factor GreA n=1 Tax=Patulibacter americanus RepID=UPI0003B58932 similarity UNIREF
DB: UNIREF100
  • Identity: 56.1
  • Coverage: 155.0
  • Bit_score: 159
  • Evalue 3.50e-36
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.6
  • Coverage: 153.0
  • Bit_score: 157
  • Evalue 1.40e-35
transcription elongation factor GreA; K03624 transcription elongation factor GreA similarity KEGG
DB: KEGG
  • Identity: 51.3
  • Coverage: 152.0
  • Bit_score: 146
  • Evalue 7.40e-33

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Taxonomy

Patulibacter medicamentivorans → Patulibacter → Solirubrobacterales → Thermoleophilia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 492
ATGAGTCCCGCGAATCAGAACGCCGGTGGGGAGCCGATCACGGCCGCCGGCATCGAAGAACTGGAAGCCGAGCTGGACGAGCTGAAAGGCCCGCGCCGGCAGGAGATGGCCGACCGCATCCGCGTCGCCCGCGAGCTCGGCGACCTCAAGGAGAACGCCGAGTACCACACGGCGAAAGACGACCAGGCGATGATGGAGACGCGGATCAAGCGGCTCGAGGAACGCCTCCGCAACGCGGTCGTGGTCGAGGCCTCCGATGGCGCCGGCGACACCTTCTCCTTCGGCCGCACCGCCGAAGTCGAGGACTCCGCCAAAGGCGAGACCGTCACCTGGACGCTGGTCGGCTCGACCGAGGCGAACCTCGCCGAAGGCAAGCTGTCCGCCGAGTCGCCGATCGGCCAGGCGCTGATGGACGCGGCCGTCGGCGCGACGGTGGAGGTCGAGACCCCGCGCGGCTCGAAAAGCTTCAAGGTCCTGAAGCTGGTCAGCTAG
PROTEIN sequence
Length: 164
MSPANQNAGGEPITAAGIEELEAELDELKGPRRQEMADRIRVARELGDLKENAEYHTAKDDQAMMETRIKRLEERLRNAVVVEASDGAGDTFSFGRTAEVEDSAKGETVTWTLVGSTEANLAEGKLSAESPIGQALMDAAVGATVEVETPRGSKSFKVLKLVS*