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SCNpilot_bf_inoc_scaffold_1619_curated_18

Organism: scnpilot_dereplicated_Solirubrobacterales_2

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(16670..17551)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2H4_CONWI similarity UNIREF
DB: UNIREF100
  • Identity: 63.4
  • Coverage: 292.0
  • Bit_score: 346
  • Evalue 3.60e-92
RNA polymerase sigma 70 {ECO:0000313|EMBL:KKA41445.1}; TaxID=1354891 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. MUSC164.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.2
  • Coverage: 296.0
  • Bit_score: 351
  • Evalue 1.60e-93
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 63.4
  • Coverage: 292.0
  • Bit_score: 346
  • Evalue 1.10e-92

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Taxonomy

Streptomyces sp. MUSC164 → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 882
ATGGGTGAGCGCGATGGGGTCGTGGCGAGGTTCGAGGCGGAGCGGCCGCGGCTGCGAGCGGTGGCCTATCGGATGCTGGGTTCGACCGGGGAGGCGGACGATGCGGTGCAGGAGGCCTGGCTGCGCTTGAGCCGGAATGATCCGGGGGAGATCGAGAACCTCGGCGGGTGGCTGACCACAGTGGTGGCGCGGATCTGCCTGAACATGCTGCGGGCGCGGAGCTCGCGGGGGGAGCGGTCGTTGGACGAGGTGCGGATGCCGGATCCGATCGTCGATCCGCTGGAGGGGACCGATCCCGAGCACGAGGCGCTGCTGGCCGACTCGGTCGGGATCGCGATGCTGCTGGTGCTGGAGACGCTGAACCCGGCGGAGCGGTTGGCTTTCGTGCTGCACGACATGTTCGGGATGCCGTTCGAGGAGATCGCGCCGATCGTCGACCGCAGCCCCGATGCCACGCGGCAGCTGGCGAGTCGCGGCCGCCGCAGGCTGCACGATGCCGACCCGGTCCCCGATGCCGACCTGGACGGGCAACGGGAGGTGGTCGAAGCGTTCATCGCCGCCGCCCGCGAGGGGGACTTCGAGCGCCTCGTCGCGGTGCTCCACCCCGACGTGGTCCTGCGCGCCGACTACGGGCCCGAGCGCGGCATCGTCGAGACCCGCGGTGCCGAGGCGGCGATCGCGCAGGCGCGGAGCTTCTCGTCGATCGGCGCCGAAGGGCACCTGGTGCGGGTCAACGGCGGCATCGGCACGGTCGCCTTCCTCGACGGCGCGCCGCTCTCGGTCGGCGCGGTGCAGGTGCGCGGCGGCCGGATCGTGGCGATCGACTTCCTCGCCGACCCCGCCCGCCTGGCCCAGCTCGACCTCGAGCGGCTGACGACCTGA
PROTEIN sequence
Length: 294
MGERDGVVARFEAERPRLRAVAYRMLGSTGEADDAVQEAWLRLSRNDPGEIENLGGWLTTVVARICLNMLRARSSRGERSLDEVRMPDPIVDPLEGTDPEHEALLADSVGIAMLLVLETLNPAERLAFVLHDMFGMPFEEIAPIVDRSPDATRQLASRGRRRLHDADPVPDADLDGQREVVEAFIAAAREGDFERLVAVLHPDVVLRADYGPERGIVETRGAEAAIAQARSFSSIGAEGHLVRVNGGIGTVAFLDGAPLSVGAVQVRGGRIVAIDFLADPARLAQLDLERLTT*