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SCNpilot_bf_inoc_scaffold_5_curated_29

Organism: scnpilot_dereplicated_Xanthomonadales_1

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: 35125..37980

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase-associated protein RapA {ECO:0000256|SAAS:SAAS00017181}; EC=3.6.4.- {ECO:0000256|SAAS:SAAS00017178};; Flags: Fragment;; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.1
  • Coverage: 886.0
  • Bit_score: 1060
  • Evalue 0.0
helicase SNF2 n=1 Tax=Dyella ginsengisoli RepID=UPI00034AA934 similarity UNIREF
DB: UNIREF100
  • Identity: 58.1
  • Coverage: 946.0
  • Bit_score: 1035
  • Evalue 0.0
DNA/RNA helicase, superfamily II, SNF2 family similarity KEGG
DB: KEGG
  • Identity: 57.5
  • Coverage: 950.0
  • Bit_score: 1017
  • Evalue 2.20e-294

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Taxonomy

Mizugakiibacter sediminis → Mizugakiibacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2856
ATGCGCAACTTTCCCGACTGCGAACCGCCAATGGACTTCATCCCCGGCCAGCGCTGGGTTTCCGAAGCAGAACCGGAACTCGGCCTCGGCACGATCCTGCGCGTCGATGACCGCGCGATCCAGGTGTTGTTCGCGAAATCCGGCGTGTTGCGCAACTACGCCTCGCACGGTGCGCCGCTCGCGCGCGCGGCATTCCGGGTCGGCCAGCGCATCGCCGGCCGCGGGATCACGTTCGTGGTCGAGCGCATCGACCTGCGTGACGGCCTGCTGGTGTATTCCGGCGAAAAACGCGAACTGGCCGAGGGCCAACTGGACGACGAACAATCACTGTCGCAAGCCGATGCGCGGCTGATTTCAACGCGCATCGACAAACCCCACCAGTACGAATTGCGCAAGCAGGCGTTGCTCGCGCACGCAGCCGCCCGGCAATCGGACGCGTGGGGCATCCTGTCCGCACGCGTCGACCTCTTGCCGCACCAGCTCGGGGTGGTCGCCGCGTGCATGGAGCGCGAACACCCACGCGTGTTGCTGGCCGACGAAGCGGGACTCGGCAAGACCATCGAGGCCGGCATGCTGGTTACCCGCATGCTCGCCACGGGCCGCGCTTCACGCGTGCTGATCCTGCTGCCCGAGGCCCTGCTGATGCAGTGGTTCGTGGAACTGCGCCGGCGTTTCCAGCTCGCCTTCGCGATCCTCGACGAGGAACGCTGCACGGCCATCGCCACGGCCGATCCCGGTCGCAATCCCTTCGAAGACGAGCAACTCGTGATCGCATCCCTCGCCTGGCTGGCGCACGCACCGGAACGTCGCGCACAGGCGCTCGCGGCCGGTTGGGACATGCTGGTGGTGGACGAGGCGCACCACCTCGAATGGACCCCGGATGCAGCCAGCGCCGAATACCTCACCGTCGAGGCGCTGGCCGCCGCGACGCCGAGCGTGGTACTGCTCACCGCGACGCCCGAACAACTCGGACGACGGGCGCACTTCGCGCGCCTGCGCCTGCTCGATCCAGCGCGTTTCGACGACCTCGACCGCTATCTTGCGGAAGCCGACGACTATGCAAGGCTGTCGCCGCTGGCCACGCGCATCGCGGCGGGTGAACCCTTGTCGGCCGTCGAACGTGCGACGCTGCACGACCGCTATCCGCACGACGAAGCCCTGCTTGCGCTGGTTGCCGACTACCCGGATGGCGCGGATGCGCTGCTGTCCGCATTGGTCGACCGCCACGGCGCCGGGCGCATCATGTTCCGCAATCGCCGCGACACGGTCGGCGGGTTTGCCGGGCGGCTGCTGGAGCTGGCGGACGATGCCGACGCGCTCGAACCACCCGCGCGCCAGGACCTGCTCGCGGAATTCGATGCGGACGTGCACGCCGGCAACACCGCCCAGCGCGCGATCGACTACTCGCGCGATCCGCGCGTCGCATGGCTGGTGCGCCTGCTCGAGGCGCACCGGGACGACAAGTTCCTGCTGATCGCGACGACCCGCGGCAAGGTCGAGGCGATCGAGGCGGCGCTGCGAACCCGCAGCGGCGCGGCCGTCGCGTGCTTCCACGAAGACATGACCTTGCTGCAGCGCGACCGCGCGGCGGCATGGTTTGCGCAAGCCGCGGGCGCGCGCGTCCTGCTGTGCTCGGAAATCGGCTCCGAGGGTCGCAACTTCCAGTTCGCGCACCGGCTCGTGATGTGGGACTTGCCGCTCGATCCGGACCTGGTCGAACAACGCATCGGCCGGCTCGACCGGATCGGACAGCGCCACGCGGTGACCCTGCACGTGCCGTCGCTGCCAGGTACCGCCCAGGAAGCGCTGGCCCGCTGGCACGCCGACGGCACGCGGGTCCTGCGCGAATGCCCTGCGGACGGGCGCGAACTGCTGCGGCGGTTCGGCGACGATGTCGTCCGGATAGCCCGGACCCATGCCGAAAGCGGTGATCCCGCGGACCCGGAGCTGGATGACGTGGTCGCGGCGACGGCCGATGCGCACGCCGGGCTTTCGCGCGCCGTCCGCGAAGGACGCGACCGCCTGCTGGAACTGGCCACCCGGCACGCCGGCGGCAAGGCCCTGCTGGAGACGATGCGCGCCGCAGACCGCGGCGAAGCAACCCACGCACTGGTACAGGAATGCTTCGAGCCCTTCGGCATCCACGTCGACGACCTTGGTGACGGCAGCCTGTTGCTCGATCCCGAATTCCTTTCCACCGACGCCCTGCCCGGCTTCAACGATGGCCCGCGTCGCGCAACCTTTGACCGCGGGCTCGCCCTTGCGCGCGAAGAACTCGACCTGTTGCGGATGGACCACCCGCTGGCCATGGGCGCGATCGACCTGCTGCTCGCGGGCGAATTCGGCAACGCATCGTTCCTGGTCGATCCTGCACTGCCGGCCCGCAGCGTGCTGCTGGAAGCCGTATACGTGGTGGAATGCGTTGCCGACGAGAGCCTCGACGTTGCGCGTTTCCTGCCGCCGACGCCGTTCGAGGTGCGCGTCGATTCCCGGCTCGCGTCGCGCGAGTACGCGCCCTCCCCGCAGGCGCTGGCGCGCGAACGTTCGCTCGACATATCCCGTTACCGCCGCCACCTCGCGCAGCTGGTGCCGCCGATGCTGGAGAAGACGGATGTCCTGGCCGTCGAACGCACGCGGGATGTCATCGGCACGGCGCTGGCGGAGGCGCGCGGCGCGCTCGATGCGCGCGTGCAGCGGCTGCGCGCGTTGGCCGAACTGCGTGCCTCCGTGCCCGACGACGAAATCGCGCACGCCGAAATGCTTCGCGCGCAGGTGATCGCCGCATTGTCCGCCGCACGCCCGCGGCTGGACGCGGTGCGGATGGTCGTCAGCCCGGACTTCCTGACGTTGCGCTGA
PROTEIN sequence
Length: 952
MRNFPDCEPPMDFIPGQRWVSEAEPELGLGTILRVDDRAIQVLFAKSGVLRNYASHGAPLARAAFRVGQRIAGRGITFVVERIDLRDGLLVYSGEKRELAEGQLDDEQSLSQADARLISTRIDKPHQYELRKQALLAHAAARQSDAWGILSARVDLLPHQLGVVAACMEREHPRVLLADEAGLGKTIEAGMLVTRMLATGRASRVLILLPEALLMQWFVELRRRFQLAFAILDEERCTAIATADPGRNPFEDEQLVIASLAWLAHAPERRAQALAAGWDMLVVDEAHHLEWTPDAASAEYLTVEALAAATPSVVLLTATPEQLGRRAHFARLRLLDPARFDDLDRYLAEADDYARLSPLATRIAAGEPLSAVERATLHDRYPHDEALLALVADYPDGADALLSALVDRHGAGRIMFRNRRDTVGGFAGRLLELADDADALEPPARQDLLAEFDADVHAGNTAQRAIDYSRDPRVAWLVRLLEAHRDDKFLLIATTRGKVEAIEAALRTRSGAAVACFHEDMTLLQRDRAAAWFAQAAGARVLLCSEIGSEGRNFQFAHRLVMWDLPLDPDLVEQRIGRLDRIGQRHAVTLHVPSLPGTAQEALARWHADGTRVLRECPADGRELLRRFGDDVVRIARTHAESGDPADPELDDVVAATADAHAGLSRAVREGRDRLLELATRHAGGKALLETMRAADRGEATHALVQECFEPFGIHVDDLGDGSLLLDPEFLSTDALPGFNDGPRRATFDRGLALAREELDLLRMDHPLAMGAIDLLLAGEFGNASFLVDPALPARSVLLEAVYVVECVADESLDVARFLPPTPFEVRVDSRLASREYAPSPQALARERSLDISRYRRHLAQLVPPMLEKTDVLAVERTRDVIGTALAEARGALDARVQRLRALAELRASVPDDEIAHAEMLRAQVIAALSAARPRLDAVRMVVSPDFLTLR*