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SCNpilot_bf_inoc_scaffold_5_curated_31

Organism: scnpilot_dereplicated_Xanthomonadales_1

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(38991..40850)

Top 3 Functional Annotations

Value Algorithm Source
preprotein translocase subunit SecD n=1 Tax=Dyella japonica RepID=UPI00030CCB9C similarity UNIREF
DB: UNIREF100
  • Identity: 65.7
  • Coverage: 626.0
  • Bit_score: 784
  • Evalue 6.40e-224
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.7
  • Coverage: 626.0
  • Bit_score: 784
  • Evalue 9.00e-224
protein-export membrane protein, SecD/SecF family similarity KEGG
DB: KEGG
  • Identity: 62.1
  • Coverage: 628.0
  • Bit_score: 752
  • Evalue 8.50e-215

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Taxonomy

Dyella japonica → Dyella → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1860
ATGAGCGACTTTCCCCGCTGGAAATACTGGCTGGTCGGCATCGTGATGGTGCTCGGCATCGTGTATGCCGCGCCCAACGCGTTCCGCCCCCAGCCTGCCGTGCAGATCGTGGCCAACCGCGAAGCCAAGGTCGACCAGGCGCTGCAAAAGCAGGTCGCGGGCGACCTCGACAAGGCCAGCATTCCGTTCCAGGACATCTCGATCGAGAAGGATCGCATGCTGGTGCGCTTCGCCAACACCGAAGTGCAGTTGCGTGGTTCGGATGCCCTGCGCGTGGCGCTCGGCGACGACTACACGGTGGCGTTGAACCTTGCGACCACGGTGCCGCAGTGGCTGCAGGCGATCGGTGCCCACGCGATGCCGTTGGGCCTCGACCTGCAGGGCGGCGTGCACTTCCTGATGGCGGTGGACCAGGACGCGGTGTTGCAGAAGCAGCAACAGCGTTACCTCGACGACATCCGCTCGACCCTGCGCCAGAAGCAGGTGCCGTATGACGTGGTGTCGCTGAGCGGCGATGGCGTACAGGCGGTATTCAAGACTTCCGCCGATCGCGACAAGGCGCTGGACGCGGTATCCGGCGACAACACCGACCTCAACATCACCACCAGCCGCACGCCGGGCGGCGGCTATGCGCTGCATGCCGCGATCAAGCCGGACGTGCTGGACAAGCTGGCGCAATCCACCATCACCCAGAACGTCACGACCTTGCGCAACCGCGTCAATGCGCTGGGCGTGTCGGAGCCGCTGATCCAGCAGCAGGGGCAGACCCGCATCGTGGTGGAACTGCCGGGTGTGCAGGACACCGCCGAGGCCAAGCGCGTGCTGGGTGCGGTGGCATCGCTGGAATACCACGCCAATGACGAGAGCGTGAATCCGCAGGAAGCCGCGCGCACCGGCAACGTGCCGCCGGACGATCGCCTGTATTTCACCAAGGACGGCCAGCCGGTGGTGCTGAAGAAGCGCGTGATCGTGAGCGGCGACGAATTGGTGGACGCCTCGTCCGGCTACGACCAGCAGACCGGCTTGCCCAACGTCAACGTCACGCTCAATTCCACCGGCGCCCGCAAGATGCTGGACTTCACCACCCAGAACGTCGGCAAGCGCATGGGGGTGGTCTACATCGAGCGCACCCCGGTGGTGAAGATCGTGGACGGCAAGGAAGTCCACAGTTCCAAGACCACCGAGACGGTGCTGAACAACGCGGTGATCCAGGGCGTGTTCGGCAAGAAATTCCAGACCACCGGCCTGACCCAGCAGGAAGCGCAGACCTTGTCGCTGATGCTGCGTTCCGGTTCGCTCGCCGCGCCCATGGACATCGTGCAGCAGAGCGTGATCGGCCCCAGCCTCGGCCAGGACAACATCAAGAAGGGCGAACGCGCGGTGATCCTGGGACTCGCGCTGGTATTGGTCGCGGCCGCGATCTACTACCGCCTGTTCGGCCTCGTTGCCGACATCGCGCTGGTGTTCAACCTGCTGATCCTGGTCGCGATCATGTCGGCGGTCGGGGTGACGCTGACCATGCCGGGCATCGCCGGCATCGTGCTGACCTTGGGCATGTCGATCGATGCCAACGTGCTGATCTGCGAGCGCATCCGCGAGGAACTGCGCAACGGGTCGACGCCGCTGGCTTCGATCCGCGCCGGTTACGAGAAGGCGTGGCACGTGATCCTCGACGCCAACGTCACCCATTTGCTGGCGGCGCTGGGCCTGATCACGGTCGGTTCCGGCGCGATCAAGGGCTTCGGCGTCACGCTGTTCATCGGCATTTCGACCTCGCTGTTCACCTCGGTGACCATGACCCATGCGATCACCGCGCTGATCCACGGCCGCCGCAAGAAACTCAAGACGTTGTGGGTTTGA
PROTEIN sequence
Length: 620
MSDFPRWKYWLVGIVMVLGIVYAAPNAFRPQPAVQIVANREAKVDQALQKQVAGDLDKASIPFQDISIEKDRMLVRFANTEVQLRGSDALRVALGDDYTVALNLATTVPQWLQAIGAHAMPLGLDLQGGVHFLMAVDQDAVLQKQQQRYLDDIRSTLRQKQVPYDVVSLSGDGVQAVFKTSADRDKALDAVSGDNTDLNITTSRTPGGGYALHAAIKPDVLDKLAQSTITQNVTTLRNRVNALGVSEPLIQQQGQTRIVVELPGVQDTAEAKRVLGAVASLEYHANDESVNPQEAARTGNVPPDDRLYFTKDGQPVVLKKRVIVSGDELVDASSGYDQQTGLPNVNVTLNSTGARKMLDFTTQNVGKRMGVVYIERTPVVKIVDGKEVHSSKTTETVLNNAVIQGVFGKKFQTTGLTQQEAQTLSLMLRSGSLAAPMDIVQQSVIGPSLGQDNIKKGERAVILGLALVLVAAAIYYRLFGLVADIALVFNLLILVAIMSAVGVTLTMPGIAGIVLTLGMSIDANVLICERIREELRNGSTPLASIRAGYEKAWHVILDANVTHLLAALGLITVGSGAIKGFGVTLFIGISTSLFTSVTMTHAITALIHGRRKKLKTLWV*