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SCNpilot_bf_inoc_scaffold_242_curated_2

Organism: scnpilot_dereplicated_Xanthomonadales_1

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: 261..572

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.1
  • Coverage: 102.0
  • Bit_score: 195
  • Evalue 5.10e-47
30S ribosomal protein S10 id=2431938 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=unknown taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 95.1
  • Coverage: 102.0
  • Bit_score: 194
  • Evalue 4.80e-47
rpsJ; 30S ribosomal protein S10; K02946 small subunit ribosomal protein S10 similarity KEGG
DB: KEGG
  • Identity: 95.1
  • Coverage: 102.0
  • Bit_score: 193
  • Evalue 3.30e-47

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Taxonomy

Lysobacter defluvii → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 312
ATGGCAACCCAGAACATCCGCATCCGGCTGAAGGCCTACGACCATCGCCTGATCGACAAGTCGGCCAGCGAGATCGTGGAGACGGCCAAGCGCACGGGCGCGCAGGTGCGCGGTCCGATTCCGCTGCCGACCAAGATCGAGCGCTACACGATCCTGGTGTCGCCGCACGTCGACAAGGACGCACGCGACCAGTACGAAACGCGCACCCACAAGCGCGTGCTGGATATCGTCGATCCCAACGACAAGACCGTGGATGCCCTGATGAAGCTCGACCTCGCCGCCGGCGTGGACGTGCAGATCAAGCTGGGTTGA
PROTEIN sequence
Length: 104
MATQNIRIRLKAYDHRLIDKSASEIVETAKRTGAQVRGPIPLPTKIERYTILVSPHVDKDARDQYETRTHKRVLDIVDPNDKTVDALMKLDLAAGVDVQIKLG*