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SCNpilot_bf_inoc_scaffold_242_curated_28

Organism: scnpilot_dereplicated_Xanthomonadales_1

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: 13215..14213

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.1
  • Coverage: 332.0
  • Bit_score: 535
  • Evalue 3.90e-149
DNA-directed RNA polymerase, alpha subunit (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 79.8
  • Coverage: 332.0
  • Bit_score: 529
  • Evalue 8.20e-148
DNA-directed RNA polymerase subunit alpha n=1 Tax=Rhodanobacter sp. 115 RepID=I4WNL2_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 80.4
  • Coverage: 332.0
  • Bit_score: 531
  • Evalue 5.30e-148

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Taxonomy

Oleiagrimonas soli → Oleiagrimonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 999
ATGGCAGTCTCTTCCACCCAGGTCTTGCGTCCGCGCGGTCTCAAAGTCGAGCCGGTCGGACCCAATCATGCGCGCGTCGTGGTCGAACCGCTGGAGCGCGGTTACGGCCACACCCTCGGCAACGCGCTGCGGCGCGTGCTGTTGTCCTCGATCGCCGGCGCGGCGATCGTCGAGGCCGAGATCGACGGCGTCCTGCACGAGTACACCACGCTCGAAGGCCTGCAGGAAGACGTCATCGAGGTGTTGTTGAACCTGAAGGGCGTCGCGATCCGCTTGAACGGCGCCGACGAGGCCACCCTGACCCTGTCCAAGAAGGGCAAGAGCGTGGTGACCGCGGGCGACATCACCACCGACCACACGGTGGAAATCGTCAATCCCGAGCACGTGATCTGCCATTTGACCAAGGACGTCACGCTCAACATGCGTCTCAGGGCGCGCCGCGGCATCGGCTACCAGCCGGCGGTCAGCCGCGTGAATCCCGACGAGGAAGCCCGCCCGATCGGCCGCCTGCAGATCGACGCCTCGTTCTGCCCGGTGCGCCGCGTCGCCTACTCGGTGGATGCCGCGCGCGTCGAACAGCGCACCAACCTCGACAAGCTGGTGCTCGACATCGAGACCAACGGCACCGTGGCGGTCGACGAGGCCGTGCGCCAGGCCGCGCAGACGCTGCACGAGCAGCTGTCGGTGTTCGGCGATTTCAAGAGCCGCGACCTCGCCGAGTCCGAGAAGGACAAGGGTGGCGTGTCGCCGCTGCTGATGCGCCCGATCGACGACCTGGAACTCACGGTGCGTTCGGCCAATTGCCTCAAGGCCGAGAGCATCTACTACATTGGCGACCTGGTGCAGAAGACCGAGGTCGAACTGTTGAAGACGCCGAACCTCGGCAAGAAGTCGCTCACCGAAATCAAGGACGTGCTCGGCGCCAAGGGCCTCGCCCTCGGCACCAAGCTGGAAAACTGGCCGCCGGCGGGGATCGTCAGCGGCATGCAGTTGGGTTGA
PROTEIN sequence
Length: 333
MAVSSTQVLRPRGLKVEPVGPNHARVVVEPLERGYGHTLGNALRRVLLSSIAGAAIVEAEIDGVLHEYTTLEGLQEDVIEVLLNLKGVAIRLNGADEATLTLSKKGKSVVTAGDITTDHTVEIVNPEHVICHLTKDVTLNMRLRARRGIGYQPAVSRVNPDEEARPIGRLQIDASFCPVRRVAYSVDAARVEQRTNLDKLVLDIETNGTVAVDEAVRQAAQTLHEQLSVFGDFKSRDLAESEKDKGGVSPLLMRPIDDLELTVRSANCLKAESIYYIGDLVQKTEVELLKTPNLGKKSLTEIKDVLGAKGLALGTKLENWPPAGIVSGMQLG*