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SCNpilot_bf_inoc_scaffold_66_curated_31

Organism: scnpilot_dereplicated_Xanthomonadales_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(40298..40855)

Top 3 Functional Annotations

Value Algorithm Source
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13) similarity KEGG
DB: KEGG
  • Identity: 78.7
  • Coverage: 183.0
  • Bit_score: 307
  • Evalue 2.20e-81
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Rhodanobacter denitrificans RepID=I4WSP6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 81.1
  • Coverage: 185.0
  • Bit_score: 325
  • Evalue 4.20e-86
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:EIL98439.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.5
  • Coverage: 184.0
  • Bit_score: 322
  • Evalue 3.80e-85

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 558
GTGAAGATCGTCGAAACGCGCCTGCCGGGCTGTGTCGCGATCGAGCCCGACGTGTTCGGCGATTCGCGCGGTTTTTTCTACGAAAGCTACAATGCGGAAAAGTACAGGGCGGCCGGGCTCGACCTGCGTTTCGTCCAGTCCAACGTCTCGCGTTCGGCGCGCGGCGTGCTGCGCGGCCTGCACTACCAGTGGCCCAATCCGCAGGGCAAGCTGGTCAGCGTGGTCGAGGGCGAGGTCTACGACGTCGCCGTCGACATCCGCCGCGGCTCGCCGACGTTCGGCCAGTGGGCCGGCGTGATCCTGTCGGCCGGGAACCATCGCCATTTCTGGGTGCCCGAGGGCTTCGCCCACGGCTTCGTCGTGCTGTCGGAATTCGCGACGTTCGCCTACCAGTGCACCAACCTCTACGACGCCAAGGCCGATGCCGGCGTGCGCTGGAACGACGCGGCGATCGCCATCGACTGGCCGGTCAGCGCACCGCTGCTGTCGGGCAAGGACGAGAAGGCGCCGCTGCTGGCCGACATCGCGCCGGAACGGCTGCCCGTCTACGCCGCGTGA
PROTEIN sequence
Length: 186
VKIVETRLPGCVAIEPDVFGDSRGFFYESYNAEKYRAAGLDLRFVQSNVSRSARGVLRGLHYQWPNPQGKLVSVVEGEVYDVAVDIRRGSPTFGQWAGVILSAGNHRHFWVPEGFAHGFVVLSEFATFAYQCTNLYDAKADAGVRWNDAAIAIDWPVSAPLLSGKDEKAPLLADIAPERLPVYAA*