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SCNpilot_bf_inoc_scaffold_304_curated_8

Organism: scnpilot_dereplicated_Xanthomonadales_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(8098..9975)

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion protein, VC_A0110 family n=1 Tax=Variovorax paradoxus B4 RepID=T1X424_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 51.8
  • Coverage: 629.0
  • Bit_score: 613
  • Evalue 2.60e-172
type VI secretion protein, VC_A0110 family similarity KEGG
DB: KEGG
  • Identity: 51.8
  • Coverage: 629.0
  • Bit_score: 613
  • Evalue 8.10e-173
Type VI secretion protein, VC_A0110 family {ECO:0000313|EMBL:AGU47363.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.8
  • Coverage: 629.0
  • Bit_score: 613
  • Evalue 3.60e-172

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1878
GTGGATCCGCGCCTGATCGGCTACTACAACACCGAGCTGAACTACCTGCGCGAACTCGGCGCCGAATTCGCCGCGGCCAATCCGAAGATCGCCGCGCGGCTGGGCATGCGCGACATCGAGGTCGCCGATCCCTACGTCGAACGCCTGCTCGAAGGCTTCAGCTTCCTGACCGCGCGCATCCAGCTCAAGATGGACGCGGAGTTCCCGCGCTTCTCGCAGCGCCTGCTCGAAGTCGTCTATCCCAACTATCTGGCGCCTACGCCGGCCATGTGCATCGTCCAGTTCACGCCGGGCGAGATGACCGGCAACCAGGGCGACTCGTTCCGCATCGGCCGCGGCGAGCGCCTGCGCGCGCCGAGTCTCGTCGAAGGGCAGAACGGCTGCGAATTCCGTACCGCCCACGACGTGGACCTCTGGCCGTTGCGCATCGCCGCCGCGCGTTTCGAGGGCGTGCCGACCGACGTGCGCGTGAACCGGCTGCGGCAGGATCTGCCGGTCAAGGCCAGCTTGCGCCTGAACTTCCAGTTCAATGCGCCGCTGAGCGGCAAGAATCCGCCGCCGGATCGCCTGTCCCTGCATCTGGCCGGCAGCCCGCACATCACCTCGCGGCTGCACGAGCTGCTCTGCGGCCACGTGCTCGGCGTGTCGGTGCGCGCGCGCAGCAAGAAGCAGGTCGGCGAATGGCGCCAGCTCGGCGCCGCGGCCGTGCAGCCCGAAGGTTTCGACGACACGCAGGCGCTGCTGCCGTACAACGGCCGCGGCTTCCAGGGCTACCGGCTGCTGCACGAATACTTCGCGTTCCCGGCGCGCTTCCATTTCGTCGCGCTGGAAGGGCTGCGCGCGGCGCTGCAGGGTGTCGAGGCGCTGGACGGCTTCGAGGTCAGCATCCTGCTCGACCAGGAAGTCGCCGATCTCGAAACCGTGGTCGACGCCGCGCATTTCCTGCTGTTCTGCACCCCGGCGGTGAACCTGATCTCGATGCGCTCGGACCGCATCCAGGTCGGCGACAGCCGCTACGAGCTGCACGTCGTGCCGGATCGCACGCATCCGCTGAACTACGAGGTCTACAGCATCGAGCAGGTCGAAGGCTTCGGCCGCGACAATGCGATCGAGGCGAAATTCCGTCCGTTCTATTCCAGCCTCGTCGGCGACCGCGGCAACCACGGCACCTATTTCACGGTGCGCCGCGAACCGCGCCTGGCGTCGAGCACGTCGGCGCGCCACGGCGCGCGTACGACCTACCTCGGCTCGGAAGTGTTCCTCTCGCTCGTGAACCAGCATGAGGCGCCGTACGGCTCTGGCCTGCGCCAGCTCGGCGTCGACATGACCGTGACCAACCGCGACCTCGCGATGCTCATGGCCGTGGGCGGCCAGCACGATCTCGTGCCGGTGGATTCGGTGCCGGTCAGCGGCGTGCGCGTGCTGCAGGGTCCGACGCGGCCGGTGTCGGCCGTGCCCGAAGGCGAGATCAGCTGGCGCCTGATCAGTCATCTGGGGCTCAACTATCAGACCCTGACCGACCTGAGCCCGGAGCAGGGCGCCCTGGCGCTGCGCGAATTGCTGAGCCTCTACACCGTGCTCGGCGACGCGGCCGTCGCGCGCCAGGCCAATGCGGTACTGCAGACGCGGCTGAATCCGATCACGCGGCGCCTGCCCGGCGCCGGTCCGATCACGTTCGGCCGCGGCGTCGGCATCGACGTGACGATCGACGAAAGCCATTTCGCCGGCACGAGCCCGTATCTGTTCGGCGCCGTGCTCGAACAGTTCCTCGCGCGGCATGTCGCATTGAACACGTTCACCGAGACGCGCCTGATCAGCGCGCAGCGCGGACAGCTCGGCCACTGGGCGCCGCGCTTCGGACGCAGGCCGGTCGCATGA
PROTEIN sequence
Length: 626
VDPRLIGYYNTELNYLRELGAEFAAANPKIAARLGMRDIEVADPYVERLLEGFSFLTARIQLKMDAEFPRFSQRLLEVVYPNYLAPTPAMCIVQFTPGEMTGNQGDSFRIGRGERLRAPSLVEGQNGCEFRTAHDVDLWPLRIAAARFEGVPTDVRVNRLRQDLPVKASLRLNFQFNAPLSGKNPPPDRLSLHLAGSPHITSRLHELLCGHVLGVSVRARSKKQVGEWRQLGAAAVQPEGFDDTQALLPYNGRGFQGYRLLHEYFAFPARFHFVALEGLRAALQGVEALDGFEVSILLDQEVADLETVVDAAHFLLFCTPAVNLISMRSDRIQVGDSRYELHVVPDRTHPLNYEVYSIEQVEGFGRDNAIEAKFRPFYSSLVGDRGNHGTYFTVRREPRLASSTSARHGARTTYLGSEVFLSLVNQHEAPYGSGLRQLGVDMTVTNRDLAMLMAVGGQHDLVPVDSVPVSGVRVLQGPTRPVSAVPEGEISWRLISHLGLNYQTLTDLSPEQGALALRELLSLYTVLGDAAVARQANAVLQTRLNPITRRLPGAGPITFGRGVGIDVTIDESHFAGTSPYLFGAVLEQFLARHVALNTFTETRLISAQRGQLGHWAPRFGRRPVA*