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SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta

Search features with annotation key words

Displaying items 61-90 of 1044 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_58
Holospora elegans, Holospora, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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54496..55260
DNA (765bp) protein (255aa)
two-component cell cycle transcriptional regulator ctrA, winged helix family protein Tax=Holospora undulata RepID=UPI00032F69A8
Cell cycle response regulator CtrA {ECO:0000313|EMBL:GAJ46463.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae; Holospora.;" source="Holospora elegans E1.;"
winged helix family two component transcriptional regulator
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_59
Wolbachia sp. wRi, Wolbachia, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55360..56640
DNA (1281bp) protein (427aa)
Na+/H+ antiporter family protein Tax=Wolbachia RepID=C0R2V9_WOLWR
Na+/H+ antiporter family protein
Na+/H+ antiporter family protein {ECO:0000313|EMBL:ACN95251.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Anaplasmataceae; Wolbachieae; Wolbachia.;" source="Wolbachia sp. subsp. Drosophila simulans (strain wRi).;"
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_60
Holospora elegans, Holospora, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56774..58126
DNA (1353bp) protein (451aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae; Holospora.;" source="Holospora elegans E1.;"
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase (EC:6.3.2.10)
UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase Tax=Holospora undulata RepID=UPI00032DC53E
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_trna_2
unknown

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58214..58286
DNA (73bp)
transferRNA Met
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_61
Holospora obtusa, Holospora, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58327..60171)
DNA (1845bp) protein (615aa)
hypothetical protein Tax=Holospora obtusa RepID=UPI0003AED84C
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae; Holospora.;" source="Holospora obtusa F1.;"
mutL; DNA mismatch repair protein mutL
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_62
Holospora elegans, Holospora, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60200..61204)
DNA (1005bp) protein (335aa)
Tetraacyldisaccharide 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093884}; EC=2.7.1.130 {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093878};; Lipid A 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae; Holospora.;" source="Holospora elegans E1.;"
lpxK; Tetraacyldisaccharide 4'-kinase (EC:2.7.1.130)
tetraacyldisaccharide 4''-kinase Tax=Holospora undulata RepID=UPI00032EF87B
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_63
unknown

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comp(61201..62241)
DNA (1041bp) protein (347aa)

This feature has no annotations

SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_64
Holospora undulata, Holospora, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(62238..64868)
DNA (2631bp) protein (877aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae; Holospora.;" source="Holospora undulata HU1.;"
Valyl-tRNA synthetase Tax=Holospora undulata RepID=UPI000330374E
valS; valyl-tRNA synthetase
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_65
unknown

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comp(64941..65366)
DNA (426bp) protein (142aa)

This feature has no annotations

SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_66
Holospora undulata, Holospora, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(65366..65818)
DNA (453bp) protein (151aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae; Holospora.;" source="Holospora undulata HU1.;"
CMP/dCMP deaminase zinc-binding protein Tax=Holospora undulata RepID=UPI000331023C
CMP/dCMP deaminase zinc-binding protein
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_67
Holospora elegans, Holospora, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65802..66434)
DNA (633bp) protein (211aa)
phosphatidate cytidylyltransferase Tax=Holospora undulata RepID=UPI00032EDDAB
Phosphatidate cytidylyltransferase {ECO:0000313|EMBL:GAJ46267.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae; Holospora.;" source="Holospora elegans E1.;"
hypothetical protein
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_68
unknown

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comp(66455..66946)
DNA (492bp) protein (164aa)

This feature has no annotations

SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_69
unknown

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comp(66946..67113)
DNA (168bp) protein (56aa)

This feature has no annotations

SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_trna_42
unknown

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comp(66954..67025)
DNA (72bp)
transferRNA Asn
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_70
unknown

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comp(67103..67714)
DNA (612bp) protein (204aa)

This feature has no annotations

SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_71
Holospora obtusa, Holospora, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(67767..69089)
DNA (1323bp) protein (441aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae; Holospora.;" source="Holospora obtusa F1.;"
transcription termination factor Rho Tax=Holospora undulata RepID=UPI00032ED52D
rho; transcription termination factor Rho
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_72
Holospora undulata, Holospora, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

69304..70659
DNA (1356bp) protein (452aa)
acetyl-CoA carboxylase (EC:6.4.1.2)
acetyl-CoA carboxylase biotin carboxylase Tax=Holospora undulata RepID=UPI00032E9983
Biotin carboxylase {ECO:0000313|EMBL:ETZ05537.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae; Holospora.;" source="Holospora undulata HU1.;"
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_73
Holospora undulata, Holospora, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

70649..71356
DNA (708bp) protein (236aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|SAAS:SAAS00018107}; EC=1.17.1.8 {ECO:0000256|SAAS:SAAS00018107};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae; Holospora.;" source="Holospora undulata HU1.;"
Dihydrodipicolinate reductase (EC:1.3.1.26)
dihydrodipicolinate reductase Tax=Holospora undulata RepID=UPI00032E0745
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_74
unknown

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71443..72201
DNA (759bp) protein (253aa)

This feature has no annotations

SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_75
unknown

Not on your lists

72240..72725
DNA (486bp) protein (162aa)

This feature has no annotations

SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_76
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(72887..73510)
DNA (624bp) protein (208aa)
Translation initiation factor IF-3 Tax=uncultured bacterium RepID=K2DVK5_9BACT
Translation initiation factor IF-3
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_77
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(73525..75471)
DNA (1947bp) protein (649aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirillum salinarum AK4.;"
Threonine--tRNA ligase Tax=Caenispirillum salinarum AK4 RepID=K9GRC1_9PROT
threonine--tRNA ligase
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_78
Holospora obtusa, Holospora, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(75464..76825)
DNA (1362bp) protein (454aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae; Holospora.;" source="Holospora obtusa F1.;"
hypothetical protein Tax=Holospora obtusa RepID=UPI0003AEDE4E
(dimethylallyl)adenosine tRNA methylthiotransferase
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_79
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(76905..77381)
DNA (477bp) protein (159aa)
tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmL {ECO:0000256|HAMAP-Rule:MF_01885}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
tRNA (cytidine(34)-2'-O)-methyltransferase Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JEY5_HYPSM
rRNA methylase
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_80
unknown

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comp(77545..78072)
DNA (528bp) protein (176aa)

This feature has no annotations

SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_trna_3
unknown

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78376..78449
DNA (74bp)
transferRNA His
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_81
unknown

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78539..79402
DNA (864bp) protein (288aa)

This feature has no annotations

SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_trna_41
unknown

Not on your lists

comp(79417..79489)
DNA (73bp)
transferRNA Lys
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_82
Holospora undulata, Holospora, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(79526..80200)
DNA (675bp) protein (225aa)
phospholipase Carboxylesterase Tax=Holospora undulata RepID=UPI0003305A92
Putative hydrolase {ECO:0000313|EMBL:ETZ04721.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae; Holospora.;" source="Holospora undulata HU1.;"
phospholipase/carboxylesterase
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_83
Holospora obtusa, Holospora, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(80202..81509)
DNA (1308bp) protein (436aa)
Proline--tRNA ligase {ECO:0000256|SAAS:SAAS00089874}; EC=6.1.1.15 {ECO:0000256|SAAS:SAAS00089874};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae; Holospora.;" source="Holospora obtusa F1.;"
hypothetical protein Tax=Holospora obtusa RepID=UPI0003AF27FD
proS; prolyl-tRNA synthetase
Displaying items 61-90 of 1044 in total

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