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SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta

Search features with annotation key words

Displaying items 901-930 of 1044 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_863
Bacillus sonorensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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860564..860914
DNA (351bp) protein (117aa)
Thioredoxin Tax=Bacillus sonorensis L12 RepID=M5P5B9_9BACI
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sonorensis L12.;"
protein TrxA2
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_864
Holospora elegans, Holospora, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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860914..861669
DNA (756bp) protein (252aa)
hypothetical protein Tax=Holospora undulata RepID=UPI00032F9A1E
Laccase domain protein {ECO:0000313|EMBL:GAJ46668.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae; Holospora.;" source="Holospora elegans E1.;"
hypothetical protein
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_865
GWF2_Alphaproteobacteria_58_20_curated, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

861671..861940
DNA (270bp) protein (90aa)
UPF0235 protein SULYE_0762 Tax=Sulfurihydrogenibium yellowstonense SS-5 RepID=C4FJL3_9AQUI
hypothetical protein
Tax=GWF2_Alphaproteobacteria_58_20_curated
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_866
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

862068..862361
DNA (294bp) protein (98aa)
10 kDa chaperonin Tax=Oceanibaculum indicum P24 RepID=K2JCC2_9PROT
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
chaperonin Cpn10
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_867
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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862373..864034
DNA (1662bp) protein (554aa)
60 kDa chaperonin Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=CH60_PARL1
chaperonin GroEL
60 kDa chaperonin {ECO:0000255|HAMAP-Rule:MF_00600}; GroEL protein {ECO:0000255|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000255|HAMAP-Rule:MF_00600}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_868
Francisella sp. W12-1067, Francisella, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

864655..864789
DNA (135bp) protein (45aa)
hypothetical protein Tax=Holospora obtusa RepID=UPI0003AF0FD0
Weak similarity to chloramphenicol phosphotransferase {ECO:0000313|EMBL:KEI34587.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Francisellaceae; Francisella.;" source="Francisella sp. W12-1067.;"
chloramphenicol phosphotransferase family protein
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_869
GWC2_Verrucomicrobia_42_7_curated, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

864886..865254
DNA (369bp) protein (123aa)
Putative chloramphenicol 3-O phosphotransferase Tax=Legionella drancourtii LLAP12 RepID=G9EPA1_9GAMM
chloramphenicol phosphotransferase
Tax=GWC2_Verrucomicrobia_42_7_curated
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_870
Holospora undulata, Holospora, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(865459..866106)
DNA (648bp) protein (216aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|SAAS:SAAS00079673}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|SAAS:SAAS00079673};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae; Holospora.;" source="Holospora undulata HU1.;"
adenylate kinase Tax=Holospora undulata RepID=UPI00033107BC
adenylate kinase
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_871
Holospora elegans, Holospora, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(866103..867428)
DNA (1326bp) protein (442aa)
preprotein translocase secY subunit Tax=Holospora undulata RepID=UPI00032F4898
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae; Holospora.;" source="Holospora elegans E1.;"
secY; preprotein translocase secY subunit
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_872
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(867429..867902)
DNA (474bp) protein (158aa)
50S ribosomal protein L15 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=RL15_RHOPB
rplO; 50S ribosomal protein L15
50S ribosomal protein L15 {ECO:0000255|HAMAP-Rule:MF_01341}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_873
Holospora undulata, Holospora, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(867899..868075)
DNA (177bp) protein (59aa)
50S ribosomal protein L30 Tax=Holospora undulata RepID=UPI00032EFC94
50S ribosomal protein L30 {ECO:0000256|SAAS:SAAS00082687}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae; Holospora.;" source="Holospora undulata HU1.;"
50S ribosomal protein L30
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_874
SAR116 cluster alpha proteobacterium HIMB100, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(868072..868596)
DNA (525bp) protein (175aa)
30S ribosomal protein S5 Tax=SAR116 cluster alpha proteobacterium HIMB100 RepID=G5ZX94_9PROT
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; species="Bacteria; Proteobacteria; Alphaproteobacteria; SAR116 cluster.;" source="SAR116 cluster alpha proteobacterium HIMB100.;"
30S ribosomal protein S5
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_875
Bartonella doshiae, Bartonella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(868624..868986)
DNA (363bp) protein (121aa)
50S ribosomal protein L18 Tax=Bartonella doshiae NCTC 12862 RepID=J1J9J2_BARDO
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bartonellaceae; Bartonella.;" source="Bartonella doshiae NCTC 12862 = ATCC 700133.;"
rplR; 50S ribosomal protein L18
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_876
Maricaulis maris, Maricaulis, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(868999..869550)
DNA (552bp) protein (184aa)
50S ribosomal protein L6 Tax=Maricaulis maris (strain MCS10) RepID=RL6_MARMM
50S ribosomal protein L6
50S ribosomal protein L6 {ECO:0000255|HAMAP-Rule:MF_01365}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Maricaulis.;" source="Maricaulis maris (strain MCS10).;"
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_877
Holospora obtusa, Holospora, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(869559..869957)
DNA (399bp) protein (133aa)
30S ribosomal protein S8 Tax=Holospora obtusa RepID=UPI0003AF0B3F
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae; Holospora.;" source="Holospora obtusa F1.;"
rpsH; 30S ribosomal protein S8
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_878
Holospora obtusa, Holospora, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(869966..870271)
DNA (306bp) protein (102aa)
hypothetical protein Tax=Holospora obtusa RepID=UPI0003AEC384
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae; Holospora.;" source="Holospora obtusa F1.;"
rpsN; 30S ribosomal protein S14
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_879
Pararhodospirillum photometricum, Pararhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(870278..870817)
DNA (540bp) protein (180aa)
50S ribosomal protein L5 Tax=Rhodospirillum photometricum DSM 122 RepID=H6SSI1_RHOPH
rplE; 50S ribosomal protein L5
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000313|EMBL:CCG07860.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Pararhodospirillum.;" source="Rhodospirillum photometricum DSM 122.;"
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_880
Capnocytophaga sp. oral taxon 332, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(870804..871178)
DNA (375bp) protein (125aa)
50S ribosomal protein L24 Tax=Capnocytophaga sp. oral taxon 332 str. F0381 RepID=L1P6L1_9FLAO
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga sp. oral taxon 332 str. F0381.;"
rplX; 50S ribosomal protein L24
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_881
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(871178..871552)
DNA (375bp) protein (125aa)
50S ribosomal protein L14 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=RL14_RHOCS
rplN; 50S ribosomal protein L14
50S ribosomal protein L14 {ECO:0000255|HAMAP-Rule:MF_01367}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_882
Holospora elegans, Holospora, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(871549..871815)
DNA (267bp) protein (89aa)
30S ribosomal protein S17 Tax=Holospora undulata RepID=UPI000330DF8C
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae; Holospora.;" source="Holospora elegans E1.;"
30S ribosomal protein S17
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_883
unknown

Not on your lists

comp(871817..872023)
DNA (207bp) protein (69aa)

This feature has no annotations

SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_884
Bartonella bovis, Bartonella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(872023..872442)
DNA (420bp) protein (140aa)
50S ribosomal protein L16 Tax=Bartonella sp. AR 15-3 RepID=E6YRN5_9RHIZ
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bartonellaceae; Bartonella.;" source="Bartonella bovis m02.;"
rplP; 50S ribosomal protein L16
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_885
Holospora undulata, Holospora, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(872449..873135)
DNA (687bp) protein (229aa)
30S ribosomal protein S3 Tax=Holospora undulata RepID=UPI0003310EA2
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae; Holospora.;" source="Holospora undulata HU1.;"
30S ribosomal protein S3
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_886
Holospora obtusa, Holospora, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(873140..873472)
DNA (333bp) protein (111aa)
50S ribosomal protein L22 Tax=Holospora obtusa RepID=UPI0003AED2A8
50S ribosomal protein L22 {ECO:0000256|RuleBase:RU004008}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae; Holospora.;" source="Holospora obtusa F1.;"
50S ribosomal protein L22
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_887
Acetobacter sp. CAG:977, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(873482..873760)
DNA (279bp) protein (93aa)
30S ribosomal protein S19 Tax=Acetobacter sp. CAG:977 RepID=R5PZ98_9PROT
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter; environmental samples.;" source="Acetobacter sp. CAG:977.;"
rpsS; 30S ribosomal protein S19
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_888
Holospora undulata, Holospora, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(873772..874617)
DNA (846bp) protein (282aa)
50S ribosomal protein L2 Tax=Holospora undulata RepID=UPI0003C4E868
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae; Holospora.;" source="Holospora undulata HU1.;"
rplB; 50S ribosomal protein L2
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_889
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(874614..874961)
DNA (348bp) protein (116aa)
50S ribosomal protein L23 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=RL23_RUEPO
rplW; ribosomal protein L23
50S ribosomal protein L23 {ECO:0000255|HAMAP-Rule:MF_01369}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3); (Silicibacter pomeroyi).;"
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_890
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(874958..875605)
DNA (648bp) protein (216aa)
hypothetical protein Tax=Holospora obtusa RepID=UPI0003AEEAC5
50S ribosomal protein L4
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_891
Rubellimicrobium thermophilum, Rubellimicrobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(875633..876319)
DNA (687bp) protein (229aa)
50S ribosomal protein L3 Tax=Rubellimicrobium thermophilum DSM 16684 RepID=S9QS64_9RHOB
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellimicrobium thermophilum DSM 16684.;"
rplC; 50S ribosomal protein L3
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_892
Loktanella vestfoldensis, Loktanella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(876323..876631)
DNA (309bp) protein (103aa)
30S ribosomal protein S10 Tax=Loktanella vestfoldensis RepID=A3V389_9RHOB
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Loktanella.;" source="Loktanella vestfoldensis SKA53.;"
rpsJ; phosphoenolpyruvate carboxykinase
Displaying items 901-930 of 1044 in total

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