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SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta

Search features with annotation key words

Displaying items 181-210 of 1044 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_169
Holospora undulata, Holospora, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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163044..164282
DNA (1239bp) protein (413aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00009759}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae; Holospora.;" source="Holospora undulata HU1.;"
tyrS; tyrosyl-tRNA synthetase (EC:6.1.1.1)
tyrosyl-tRNA synthetase Tax=Holospora undulata RepID=UPI0003C4E568
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_170
Holospora undulata, Holospora, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(164301..165245)
DNA (945bp) protein (315aa)
glycosyltransferase Tax=Holospora undulata RepID=UPI0003306998
Glycosyltransferase 25 family member {ECO:0000313|EMBL:ETZ04860.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae; Holospora.;" source="Holospora undulata HU1.;"
glycosyl transferase family protein
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_171
Holospora undulata, Holospora, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(165375..166310)
DNA (936bp) protein (312aa)
glycosyltransferase Tax=Holospora undulata RepID=UPI0003306998
Glycosyltransferase 25 family member {ECO:0000313|EMBL:ETZ04860.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae; Holospora.;" source="Holospora undulata HU1.;"
glycosyltransferase involved in LPS biosynthesis
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_172
Holospora undulata, Holospora, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(166379..167302)
DNA (924bp) protein (308aa)
glycosyltransferase Tax=Holospora undulata RepID=UPI0003306998
Glycosyltransferase 25 family member {ECO:0000313|EMBL:ETZ04860.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae; Holospora.;" source="Holospora undulata HU1.;"
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_173
unknown

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comp(167368..167691)
DNA (324bp) protein (108aa)

This feature has no annotations

SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_174
Holospora undulata, Holospora, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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167903..169627
DNA (1725bp) protein (575aa)
single-stranded-DNA-specific exonuclease RecJ Tax=Holospora undulata RepID=UPI0003313D1D
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:ETZ04646.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae; Holospora.;" source="Holospora undulata HU1.;"
single-stranded DNA exonuclease
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_175
Holospora obtusa, Holospora, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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169795..170199
DNA (405bp) protein (135aa)
hypothetical protein Tax=Holospora obtusa RepID=UPI0003AEC692
Inner membrane protein YgaP {ECO:0000313|EMBL:ETZ07030.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae; Holospora.;" source="Holospora obtusa F1.;"
membrane protein
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_176
Holospora obtusa, Holospora, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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170221..171084
DNA (864bp) protein (288aa)
hypothetical protein Tax=Holospora obtusa RepID=UPI0003AEB3B9
Glyoxylase B2 {ECO:0000313|EMBL:ETZ07032.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae; Holospora.;" source="Holospora obtusa F1.;"
metallo-beta-lactamase family protein
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_177
unknown

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comp(171313..171612)
DNA (300bp) protein (100aa)

This feature has no annotations

SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_178
unknown

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comp(171823..172464)
DNA (642bp) protein (214aa)

This feature has no annotations

SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_179
unknown

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172578..173378
DNA (801bp) protein (267aa)

This feature has no annotations

SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_180
unknown

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173412..173804
DNA (393bp) protein (131aa)

This feature has no annotations

SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_181
Holospora undulata, Holospora, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(173799..174995)
DNA (1197bp) protein (399aa)
hypothetical protein Tax=Holospora undulata RepID=UPI00032FCD3D
Uncharacterized protein {ECO:0000313|EMBL:ETZ05271.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae; Holospora.;" source="Holospora undulata HU1.;"
hypothetical protein
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_182
Holospora obtusa, Holospora, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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175091..175804
DNA (714bp) protein (238aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae; Holospora.;" source="Holospora obtusa F1.;"
ribonuclease III (EC:3.1.26.3)
hypothetical protein Tax=Holospora obtusa RepID=UPI0003AEF8A8
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_183
Holospora undulata, Holospora, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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175804..176679
DNA (876bp) protein (292aa)
GTPase Era Tax=Holospora undulata RepID=UPI000330BC05
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae; Holospora.;" source="Holospora undulata HU1.;"
GTP-binding protein Era
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_184
Yersinia enterocolitica, Yersinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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177114..178412
DNA (1299bp) protein (433aa)
Uncharacterized protein Tax=Yersinia enterocolitica RepID=E7B4N0_YERE1
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ41159.1}; Flags: Fragment;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia.;" source="Yersinia enterocolitica (type O:5) str. YE53/03.;"
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_185
unknown

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comp(178532..180397)
DNA (1866bp) protein (622aa)

This feature has no annotations

SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_186
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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180601..182403
DNA (1803bp) protein (601aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthase Tax=Clostridium sp. CAG:7 RepID=R5ILF1_9CLOT
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_187
Holospora elegans, Holospora, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

182439..183302
DNA (864bp) protein (288aa)
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078538};; 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; KDO-8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; Phospho-2-dehydro-3-deoxyoctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae; Holospora.;" source="Holospora elegans E1.;"
2-dehydro-3-deoxyphosphooctonate aldolase (EC:2.5.1.55)
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) Tax=Holospora undulata RepID=UPI00032E1668
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_188
Holospora elegans, Holospora, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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183453..184886
DNA (1434bp) protein (478aa)
PpiC-type peptidyl-prolyl cis-trans isomerase Tax=Holospora undulata RepID=UPI00032F0359
Periplasmic folding chaperone {ECO:0000313|EMBL:GAJ45847.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae; Holospora.;" source="Holospora elegans E1.;"
peptidyl-prolyl cis-trans isomerse D
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_189
Holospora obtusa, Holospora, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

184887..185240
DNA (354bp) protein (118aa)
hypothetical protein Tax=Holospora obtusa RepID=UPI0003AED041
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae; Holospora.;" source="Holospora obtusa F1.;"
iojap-like ribosome-associated protein
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_190
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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185252..186013
DNA (762bp) protein (254aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171, ECO:0000313|EMBL:KIL98118.1}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003792};; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magnetotacticum MS-1.;"
tRNA pseudouridine synthase A Tax=Xanthobacteraceae RepID=UPI00035EACD5
pseudouridylate synthase
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_191
unknown

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186087..186209
DNA (123bp) protein (41aa)

This feature has no annotations

SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_192
unknown

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186184..186795
DNA (612bp) protein (204aa)

This feature has no annotations

SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_193
Holospora obtusa, Holospora, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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186918..188270
DNA (1353bp) protein (451aa)
hypothetical protein Tax=Holospora obtusa RepID=UPI0003AEF21B
Nitrogen assimilation regulatory protein NtrX {ECO:0000313|EMBL:ETZ07631.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae; Holospora.;" source="Holospora obtusa F1.;"
ATPase AAA
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_194
unknown

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188315..188935
DNA (621bp) protein (207aa)

This feature has no annotations

SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_195
Holospora undulata, Holospora, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(189066..190832)
DNA (1767bp) protein (589aa)
beta-lactamase Tax=Holospora undulata RepID=UPI00039F3CC7
Putative ribonuclease Jc {ECO:0000313|EMBL:ETZ04845.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae; Holospora.;" source="Holospora undulata HU1.;"
hypothetical protein
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_196
Schizosaccharomyces pombe, Schizosaccharomyces, Schizosaccharomycetales, Schizosaccharomycetes, Ascomycota, Fungi

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comp(191022..192773)
DNA (1752bp) protein (584aa)
Protein gar2 Tax=Schizosaccharomyces pombe (strain 972 / ATCC 24843) RepID=GAR2_SCHPO
Protein gar2; species="Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces.;" source="Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast).;"
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_197
Holospora obtusa, Holospora, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(192844..193770)
DNA (927bp) protein (309aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae; Holospora.;" source="Holospora obtusa F1.;"
hypothetical protein Tax=Holospora obtusa RepID=UPI0003AEBCF8
UDP-N-acetylenolpyruvoylglucosamine reductase
SCNpilot_BF_INOC_Rickettsiales_complete_39_4.fasta_198
Holospora elegans, Holospora, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(193779..195155)
DNA (1377bp) protein (459aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000256|HAMAP-Rule:MF_00046}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae; Holospora.;" source="Holospora elegans E1.;"
UDP-N-acetylmuramate--L-alanine ligase Tax=Holospora undulata RepID=UPI00032DCB08
murC; UDP-N-acetylmuramate-alanine ligase
Displaying items 181-210 of 1044 in total

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