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SCNpilot_BF_INOC_scaffold_2658_curated

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_2658_curated_1
Lactobacillus curieae, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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2..157
DNA (156bp) protein (52aa)
ABC transporter related protein n=1 Tax=Caldicellulosiruptor hydrothermalis (strain DSM 18901 / VKM B-2411 / 108) RepID=E4Q7Y0_CALH1
Multidrug ABC transporter ATP-binding protein {ECO:0000313|EMBL:KHD02109.1}; TaxID=1138822 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus curieae.;"
ABC transporter-like protein
SCNpilot_BF_INOC_scaffold_2658_curated_2
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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159..866
DNA (708bp) protein (236aa)
Purine nucleoside phosphorylase DeoD-type {ECO:0000256|HAMAP-Rule:MF_01627}; Short=PNP {ECO:0000256|HAMAP-Rule:MF_01627};; EC=2.4.2.1 {ECO:0000256|HAMAP-Rule:MF_01627};; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
Purine nucleoside phosphorylase DeoD-type n=1 Tax=Clostridium sp. CAG:413 RepID=R6NBE2_9CLOT rbh
purine-nucleoside phosphorylase
SCNpilot_BF_INOC_scaffold_2658_curated_3
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

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880..1287
DNA (408bp) protein (136aa)
cytidine deaminase n=1 Tax=Butyrivibrio sp. NC2007 RepID=UPI0003B43E1B
Cytidine deaminase {ECO:0000313|EMBL:EOS46535.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
cytidine deaminase
SCNpilot_BF_INOC_scaffold_2658_curated_4
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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1284..2606
DNA (1323bp) protein (441aa)
pyn; pyrimidine-nucleoside phosphorylase (EC:2.4.2.2) rbh
Pyrimidine-nucleoside phosphorylase n=3 Tax=Lachnospiraceae RepID=C9L487_BLAHA rbh
Uncharacterized protein {ECO:0000313|EMBL:EGG79708.1}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
SCNpilot_BF_INOC_scaffold_2658_curated_5
RBG_13_Caldithrix_44_9_curated, Caldithrix, Bacteria

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comp(2750..3823)
DNA (1074bp) protein (358aa)
2-nitropropane dioxygenase NPD id=7201523 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06 rbh
2-nitropropane dioxygenase-like enzyme rbh
Tax=RBG_13_Caldithrix_44_9_curated
SCNpilot_BF_INOC_scaffold_2658_curated_6
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4160..4480)
DNA (321bp) protein (107aa)
UPF0145 protein CLO_1218 n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5URJ1_CLOBO
hypothetical protein
UPF0145 protein CLO_1218 {ECO:0000256|HAMAP-Rule:MF_00338}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
SCNpilot_BF_INOC_scaffold_2658_curated_7
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4502..5161)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF356 RepID=N1ZGR9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ15036.1}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)
SCNpilot_BF_INOC_scaffold_2658_curated_8
Paenibacillus sp. JCM 10914, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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5312..6229
DNA (918bp) protein (306aa)
Transcriptional regulator, PadR family n=1 Tax=Paenibacillus sp. JCM 10914 RepID=V9GFJ6_9BACL rbh
Transcriptional regulator, PadR family {ECO:0000313|EMBL:GAE08762.1}; TaxID=1236974 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. JCM 10914.;"
putative transcriptional regulator
SCNpilot_BF_INOC_scaffold_2658_curated_9
BJP_IG2069_Clostridiales_42_11, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6276..7130)
DNA (855bp) protein (285aa)
Putative uncharacterized protein id=2807746 bin=GWC2_Clostridiales_40_7 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Clostridiales_40_7 organism_group=Firmicute
dioxygenase
Tax=BJP_IG2069_Clostridiales_42_11
SCNpilot_BF_INOC_scaffold_2658_curated_10
unknown

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7752..8048
DNA (297bp) protein (99aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2658_curated_11
unknown

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9468..10346
DNA (879bp) protein (293aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2658_curated_12
unknown

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10708..10980
DNA (273bp) protein (91aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2658_curated_13
unknown

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11809..11970
DNA (162bp) protein (54aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2658_curated_14
Lysinibacillus odysseyi, Lysinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(12122..12622)
DNA (501bp) protein (167aa)
RNA polymerase n=1 Tax=Oceanobacillus sp. Ndiop RepID=UPI00028977EB
RNA polymerase {ECO:0000313|EMBL:KGR81859.1}; TaxID=1220589 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus.;" source="Lysinibacillus odysseyi 34hs-1 = NBRC 100172.;"
RNA polymerase subunit sigma-24
SCNpilot_BF_INOC_scaffold_2658_curated_15
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12848..13657
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KGA3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN34463.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
xylose isomerase domain protein TIM barrel
SCNpilot_BF_INOC_scaffold_2658_curated_16
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15149..15271)
DNA (123bp) protein (41aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J3CWH2_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL79919.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
stereocilin
Displaying 16 items

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