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SCNpilot_BF_INOC_scaffold_2140_curated

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_2140_curated_1
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

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2..301
DNA (300bp) protein (100aa)
Transcriptional regulator with HTH domain and aminotransferase domain id=2752604 bin=GWF2_Clostridiales_36_10 species=Clostridium clariflavum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
transcriptional regulator with HTH domain and aminotransferase domain
Tax=GWF2_Clostridiales_36_10_curated
SCNpilot_BF_INOC_scaffold_2140_curated_2
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(307..1002)
DNA (696bp) protein (232aa)
Nicotinamide riboside transporter PnuC n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D646_9CLOT rbh
Nicotinamide riboside transporter PnuC {ECO:0000313|EMBL:EEG53180.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
pnuC; nicotinamide mononucleotide transporter PnuC
SCNpilot_BF_INOC_scaffold_2140_curated_3
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1007..2011)
DNA (1005bp) protein (335aa)
Putative nicotinamide-nucleotide adenylyltransferase n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D647_9CLOT rbh
Putative nicotinamide-nucleotide adenylyltransferase {ECO:0000313|EMBL:EEG53181.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
cytidyltransferase rbh
SCNpilot_BF_INOC_scaffold_2140_curated_4
unknown

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2126..2266
DNA (141bp) protein (47aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2140_curated_5
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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2282..3052
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MJ31_CORCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFE04498.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086; / M2) (Myxococcus coralloides).;"
SCNpilot_BF_INOC_scaffold_2140_curated_6
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

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3049..3720
DNA (672bp) protein (224aa)
4Fe-4S binding domain protein id=4331926 bin=GWF2_Clostridiales_36_10 species=Clostridium leptum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute rbh
4Fe-4S ferredoxin
Tax=GWF2_Clostridiales_36_10_curated
SCNpilot_BF_INOC_scaffold_2140_curated_7
Desulfosporosinus acidiphilus, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3780..4280
DNA (501bp) protein (167aa)
Putative transcriptional regulator n=1 Tax=Desulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4) RepID=I4D5Q7_DESAJ
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:AFM41131.1}; TaxID=646529 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4).;"
SCNpilot_BF_INOC_scaffold_2140_curated_8
Desulfosporosinus acidiphilus, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4350..4919
DNA (570bp) protein (190aa)
Esterase/lipase n=1 Tax=Desulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4) RepID=I4D5Q8_DESAJ
esterase/lipase
Esterase/lipase {ECO:0000313|EMBL:AFM41132.1}; TaxID=646529 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4).;"
SCNpilot_BF_INOC_scaffold_2140_curated_9
Desulfosporosinus meridiei, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5004..5405
DNA (402bp) protein (134aa)
UPF0251 protein Desmer_1222 n=1 Tax=Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10) RepID=J7IVS5_DESMD
DNA-binding protein
UPF0251 protein Desmer_1222 {ECO:0000256|HAMAP-Rule:MF_00674}; TaxID=768704 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB; 13706 / S10).;"
SCNpilot_BF_INOC_scaffold_2140_curated_10
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

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5402..6241
DNA (840bp) protein (280aa)
ParA/MinD-like ATPase (EC:3.6.-.-) rbh
ATPase involved in chromosome partitioning id=3475062 bin=GWF2_Clostridiales_38_85 species=Clostridium clariflavum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212 rbh
Tax=GWF2_Clostridiales_38_85_curated
SCNpilot_BF_INOC_scaffold_2140_curated_11
Desulfosporosinus sp. I2, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6246..6719
DNA (474bp) protein (158aa)
Putative permease {ECO:0000313|EMBL:KJR48816.1}; TaxID=1617025 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. I2.;"
Putative uncharacterized protein id=1805704 bin=GWE2_Firmicute_51_13 species=Alkaliphilus metalliredigens genus=Alkaliphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
permease
SCNpilot_BF_INOC_scaffold_2140_curated_12
Desulfosporosinus sp. I2, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6716..7264
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI0002E44AD1
Uncharacterized protein {ECO:0000313|EMBL:KJR48817.1}; TaxID=1617025 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. I2.;"
permease
SCNpilot_BF_INOC_scaffold_2140_curated_13
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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7426..7782
DNA (357bp) protein (119aa)
Transcriptional regulator n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9TA39_9EURY
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AGN26228.1}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" source="Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1.;"
SCNpilot_BF_INOC_scaffold_2140_curated_14
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7797..9722
DNA (1926bp) protein (642aa)
heavy metal-translocating P-type ATPase (EC:3.6.1.-) rbh
Cadmium-exporting ATPase n=1 Tax=Enterococcus faecalis TX1342 RepID=E6FTJ5_ENTFL rbh
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:EEU17288.1}; TaxID=565642 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis ATCC 4200.;"
SCNpilot_BF_INOC_scaffold_2140_curated_15
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9967..10779
DNA (813bp) protein (271aa)
membrane protein n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2CC8B
Putative permease {ECO:0000313|EMBL:AJG99947.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_2140_curated_16
Paenibacillus pini, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10864..13689
DNA (2826bp) protein (942aa)
Uncharacterized protein n=1 Tax=Paenibacillus sp. JCM 10914 RepID=V9GFJ5_9BACL
Parallel beta-helix repeat {ECO:0000313|EMBL:GAF07670.1}; TaxID=1236976 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus pini JCM 16418.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_2140_curated_17
Eubacterium sp. CAG:252, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13811..14044
DNA (234bp) protein (78aa)
Glycoside Hydrolase Family 73 protein n=1 Tax=Eubacterium sp. CAG:252 RepID=R6JXK0_9FIRM
Glycoside Hydrolase Family 73 protein {ECO:0000313|EMBL:CDB67523.1}; TaxID=1262887 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:252.;"
Beta-N-acetylglucosaminidase
SCNpilot_BF_INOC_scaffold_2140_curated_18
Treponema brennaborense, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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14112..14588
DNA (477bp) protein (159aa)
HD superfamily hydrolase n=1 Tax=Treponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3) RepID=F4LN55_TREBD
HD superfamily hydrolase
HD superfamily hydrolase {ECO:0000313|EMBL:AEE16820.1}; TaxID=906968 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3).;"
Displaying 18 items

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