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SCNpilot_BF_INOC_scaffold_2404_curated

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_2404_curated_1
unknown

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2..82
DNA (81bp) protein (27aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2404_curated_trna_3
unknown

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comp(48..120)
DNA (73bp)
transferRNA Thr
SCNpilot_BF_INOC_scaffold_2404_curated_trna_2
unknown

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comp(196..269)
DNA (74bp)
transferRNA Pro
SCNpilot_BF_INOC_scaffold_2404_curated_2
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(275..604)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EAY4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG31365.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_2404_curated_3
BJP_IG2158_Thermincola_46_17, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

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747..1283
DNA (537bp) protein (179aa)
Carbonic anhydrase n=1 Tax=Dehalococcoides mccartyi GY50 RepID=V5QCU5_9CHLR
carbonic anhydrase
Tax=BJP_IG2158_Thermincola_46_17
SCNpilot_BF_INOC_scaffold_2404_curated_4
[Clostridium] cellulolyticum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1636..2526
DNA (891bp) protein (297aa)
Enolase {ECO:0000255|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000255|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000255|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000255|HAMAP-Rule:MF_00318}; TaxID=394503 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 /; H10).;"
Enolase n=1 Tax=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) RepID=ENO_CLOCE rbh
eno; phosphopyruvate hydratase rbh
SCNpilot_BF_INOC_scaffold_2404_curated_5
Eubacterium sp. CAG:252, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2523..2918)
DNA (396bp) protein (132aa)
TspO/MBR family protein n=1 Tax=Clostridium sp. CAG:505 RepID=R7BBP6_9CLOT
TspO/MBR family protein {ECO:0000313|EMBL:CDB68869.1}; TaxID=1262887 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:252.;"
TspO and MBR like protein
SCNpilot_BF_INOC_scaffold_2404_curated_trna_1
unknown

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3120..3193
DNA (74bp)
transferRNA Arg
SCNpilot_BF_INOC_scaffold_2404_curated_6
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3219..4205
DNA (987bp) protein (329aa)
Abortive infection protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6IUP3_9FIRM
Abortive infection protein {ECO:0000313|EMBL:CDB41717.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
Abortive infection protein
SCNpilot_BF_INOC_scaffold_2404_curated_7
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4202..5203
DNA (1002bp) protein (334aa)
Abortive infection protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6IUP3_9FIRM
Abortive infection protein {ECO:0000313|EMBL:CDB41717.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
putative membrane protein
SCNpilot_BF_INOC_scaffold_2404_curated_8
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5205..5660
DNA (456bp) protein (152aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
Cytidine and deoxycytidylate deaminase zinc-binding region n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6ENG9_9FIRM
CMP/dCMP deaminase zinc-binding protein
SCNpilot_BF_INOC_scaffold_2404_curated_9
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5687..6301)
DNA (615bp) protein (205aa)
Putative uncharacterized protein n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U8C2_ETHHY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDZ23273.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
SCNpilot_BF_INOC_scaffold_2404_curated_10
Pectobacterium carotovorum, Pectobacterium, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6387..7130
DNA (744bp) protein (248aa)
SMC protein-like protein n=1 Tax=Pectobacterium carotovorum subsp. carotovorum PCC21 RepID=J7KVR7_PECCC
ATPase AAA
SMC protein-like protein {ECO:0000313|EMBL:KHN90669.1}; TaxID=1507808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pectobacterium.;" source="Pectobacterium carotovorum subsp. actinidiae.;"
SCNpilot_BF_INOC_scaffold_2404_curated_11
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7151..7465
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:349 RepID=R6WQ83_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD09089.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
methylated-DNA--protein-cysteine methyltransferase
SCNpilot_BF_INOC_scaffold_2404_curated_12
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7547..8875
DNA (1329bp) protein (443aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9M4D2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS65561.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
integral membrane protein-like protein
SCNpilot_BF_INOC_scaffold_2404_curated_13
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8841..11126
DNA (2286bp) protein (762aa)
Uncharacterized protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6NFD8_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:CDC04936.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
hypothetical protein rbh
SCNpilot_BF_INOC_scaffold_2404_curated_14
unknown

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11123..11446
DNA (324bp) protein (108aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2404_curated_15
Firmicutes bacterium CAG:95, Firmicutes, Bacteria

Not on your lists

11446..11592
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:95 RepID=R7N758_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF08486.1}; TaxID=1262988 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:95.;"
glycosyl transferase GT2 family protein
Displaying 18 items

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