ggKbase home page

SCNpilot_BF_INOC_scaffold_3888_curated_5

Organism: scnpilot_dereplicated_Clostridiales_2

partial RP 42 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 12 / 38 MC: 2
Location: 4805..5713

Top 3 Functional Annotations

Value Algorithm Source
Transporter auxin efflux carrier domain protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YIW3_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 38.7
  • Coverage: 168.0
  • Bit_score: 133
  • Evalue 2.20e-28
Transporter auxin efflux carrier domain protein {ECO:0000313|EMBL:CDD31364.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.7
  • Coverage: 168.0
  • Bit_score: 133
  • Evalue 3.10e-28
putative membrane protein similarity KEGG
DB: KEGG
  • Identity: 38.0
  • Coverage: 171.0
  • Bit_score: 113
  • Evalue 6.70e-23

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Firmicutes bacterium CAG:94 → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 909
ATGCGCGTATTTCAATACGGACAGACAATTTTTATACAGGTCATCATCATGGCGGTTCTGATGCTTCTCGGTTATGTTCTCACAAGGCGTGGAAAGCTATCCGGGGTGACGGTGAAGGAGCTAACTTCCCTTGTATTCAATGTGGTAACACCTTGTGTGATTGTCAATGCGTTTTTGCGTGTTGATTTTAATATGAAATACATCCAAAACCTGCTGCTTGCAGGCGCGCTTGCACTTTTGTCTCACCTGGCGGGTTTTTTGGCAGGCTTTCTTTTTTATCGGGTGAAACCCTATCATAAGCAGGTGGTATACCGGTTCGGCTCCATGATCAGCAATGCGGCCTTCATGGCGCTACCTTTGGCACAGGCTGTCCTTGACAGTGAGGGCGTTCTGTATGTCAGTATCTATGTGATCATGGTCAACGTCTTCAACTGGACAGTGGGCAGGGCACTGTTCAAAACGGATGAAAAGGTCTCACGAGTGAAAATGCTGTTTAATCCCGGTGTCATCGGCGTGTTGTTCGGCATTTNNNNNNNNNNNNACACTGTCCTACATGGCGGCTATGAACACCCCCCTTGCGATGATTGTTACCGGCTATTATCTCGTGGGAACAAGGATCAAAGCCTGTATCACAGATCCCTTTGCATGGTTGACGGTTCTGTTACGACAGGCCGCACTGCCGATTTTGCTCATGCTTCTTTACCGCTACGCCTTCGGCATCGGCGGCATGCTGCTGATGAGCGCTGTTTTGCCTGTGGCGGCACCCTGTGCTGTGATTGTCATTATGTTCTCGGCGGCCTTCGGGGGCGACGAAAAAACAGCGACTCAGCTGGTTTCATTGTCAACGGTCACCGCGATTCTTTCCATGCCGCTGGTGTTGATTGTCAGTCAGTTGATCAAATAAAGTAA
PROTEIN sequence
Length: 303
MRVFQYGQTIFIQVIIMAVLMLLGYVLTRRGKLSGVTVKELTSLVFNVVTPCVIVNAFLRVDFNMKYIQNLLLAGALALLSHLAGFLAGFLFYRVKPYHKQVVYRFGSMISNAAFMALPLAQAVLDSEGVLYVSIYVIMVNVFNWTVGRALFKTDEKVSRVKMLFNPGVIGVLFGIXXXXXTVLHGGYEHPPCDDCYRLLSRGNKDQSLYHRSLCMVDGSVTTGRTADFAHASLPLRLRHRRHAADERCFACGGTLCCDCHYVLGGLRGRRKNSDSAGFIVNGHRDSFHAAGVDCQSVDQIK*