ggKbase home page

SCNpilot_BF_INOC_scaffold_23250_curated_1

Organism: scnpilot_dereplicated_Acinetobacter_3

partial RP 39 / 55 MC: 5 BSCG 40 / 51 MC: 7 ASCG 7 / 38 MC: 3
Location: comp(2..355)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1217711 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp. NIPH 236.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 118.0
  • Bit_score: 246
  • Evalue 1.30e-62
tRNA pseudouridine synthase A n=1 Tax=Acinetobacter sp. NIPH 236 RepID=N8R3T8_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 118.0
  • Bit_score: 246
  • Evalue 9.20e-63
truA; tRNA-pseudouridine synthase I similarity KEGG
DB: KEGG
  • Identity: 86.4
  • Coverage: 118.0
  • Bit_score: 219
  • Evalue 3.40e-55

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Acinetobacter sp. NIPH 236 → Acinetobacter → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 354
ATGCAACGTTATGCAATCGGTATTGAATTTTGTGGCACGCAATACCGTGGTTGGCAAACCCAGCAGGCTGGCGTTGTAACTGTTCAGGAAACCATCGAGAAAGTGCTGAGCCGTATTGCTAATGAGCCCATTATTTTGCATGGTGCTGGACGAACTGATGCTGGTGTACATGCAACCAATATGGTAGCTCATTTCGATACCGAAGCCATTCGCCCAGAACAAGGTTGGATTCGTGGTGCCAATAGCCAACTTCCAAAAGATATTTCAATTCAATGGATTAAATGCATGGATGAGAACTTCCATGCACGGTTCAAAGCCACTGCACGACGTTATCGTTATGTCGTCTATAACGCA
PROTEIN sequence
Length: 118
MQRYAIGIEFCGTQYRGWQTQQAGVVTVQETIEKVLSRIANEPIILHGAGRTDAGVHATNMVAHFDTEAIRPEQGWIRGANSQLPKDISIQWIKCMDENFHARFKATARRYRYVVYNA