ggKbase home page

SCNpilot_BF_INOC_scaffold_7457_curated_1

Organism: scnpilot_dereplicated_Acinetobacter_3

partial RP 39 / 55 MC: 5 BSCG 40 / 51 MC: 7 ASCG 7 / 38 MC: 3
Location: comp(2..757)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Acinetobacter sp. ANC 3862 RepID=N9M7H0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 252.0
  • Bit_score: 496
  • Evalue 1.10e-137
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1217705 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp. ANC 3862.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 252.0
  • Bit_score: 496
  • Evalue 1.50e-137
rpoD; sigma D (sigma 70) factor of RNA polymerase , major sigma factor during exponential growth similarity KEGG
DB: KEGG
  • Identity: 89.7
  • Coverage: 253.0
  • Bit_score: 451
  • Evalue 8.70e-125

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Acinetobacter sp. ANC 3862 → Acinetobacter → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 756
ATGAGCGATATGAATTCCCCTACTTCGCAAGTAGCGGCTCTGATTAGCCGAGGCAAAGAACAAGGTTACTTAACTTACGCTGAGGTTAACGATCATCTACCAGACTCAATTACGGAAAGTGAGCAGATTGAAGACATCATCCAGATGCTTCAAGACGTTGGTATTCCAGTGCATGAACGTGCACCAGAAACTGATGACACCATGTTTGGTGAATCTACTGAAGCTGCGGACGAAGTCGCTGAAGAAGAAGCTGCTGCCGTATTAGCATCGGTTGAAAGTGAGCCTGGTCGTACCACTGACCCTGTACGTATGTATATGCGTGAAATGGGGACAGTTGAACTTTTAACACGTGAAGGCGAAATTAGCATTGCAAAACGTATCGAAGAAGGTATTCGTGACGTTTTACATTCAATTGCTTATTGGCCAAATGCTGTTGAAGTCGTTTTACAAGAATATAATGACTTTTTAACAGGTGAGCGTCGTCTTGCCGATATTCTTTCTGGCTACTTAGACCCAGAAACTGATGATGACATTCCAGAAGTACTGGAAGAAGAAGCAGAACTTGAAGAAGCTGAAAGCGCTTCACCTGCGACAAAAGATGTAAAACTTGATGATGATGACGAAGACGAAGAATCTGAAGGTGATGATGATTCTGAAGGTGAATCTGGACCTGACCCTGAAATTGCTAAAATTCGTTTTTCTGAACTAGAAGCTGCTTGGAATGATACAAAAGCAATTGTAGCAAAACATGGTCGC
PROTEIN sequence
Length: 252
MSDMNSPTSQVAALISRGKEQGYLTYAEVNDHLPDSITESEQIEDIIQMLQDVGIPVHERAPETDDTMFGESTEAADEVAEEEAAAVLASVESEPGRTTDPVRMYMREMGTVELLTREGEISIAKRIEEGIRDVLHSIAYWPNAVEVVLQEYNDFLTGERRLADILSGYLDPETDDDIPEVLEEEAELEEAESASPATKDVKLDDDDEDEESEGDDDSEGESGPDPEIAKIRFSELEAAWNDTKAIVAKHGR