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SCNpilot_BF_INOC_scaffold_49573_curated_1

Organism: scnpilot_dereplicated_Acinetobacter_3

partial RP 39 / 55 MC: 5 BSCG 40 / 51 MC: 7 ASCG 7 / 38 MC: 3
Location: comp(1..345)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=471 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; Acinetobacter calcoaceticus/baumannii complex.;" source="Acinetobacter calcoaceticus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.1
  • Coverage: 115.0
  • Bit_score: 234
  • Evalue 6.40e-59
DNA-directed RNA polymerase subunit beta n=2 Tax=Acinetobacter RepID=N9PT03_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 99.1
  • Coverage: 115.0
  • Bit_score: 234
  • Evalue 4.60e-59
rpoB similarity KEGG
DB: KEGG
  • Identity: 99.1
  • Coverage: 115.0
  • Bit_score: 234
  • Evalue 1.30e-59

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Taxonomy

Acinetobacter calcoaceticus → Acinetobacter → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 345
TTGTCTCCACAAGATTTAATCAACGCAAAACCAGTTGCTGCTGCAATCAAAGAATTCTTTGGTTCAAGCCAATTGTCTCAGTTCATGGATCAAAACAACCCATTGTCTGAGATTACACACAAACGTCGTGTATCTGCGCTTGGTCCTGGTGGTTTGACACGTGAACGCGCGGGCTTCGAAGTACGTGACGTACATCAAACTCACTACGGTCGTGTTTGTCCAATTGAAACGCCTGAGGGTCCAAACATTGGTTTGATCAACTCGCTTTCTGTCTATGCAAAAGCGAATGACTTCGGTTTCTTGGAAACACCATACCGTAAAGTTGTTGATGGTCGTGTGACTGAT
PROTEIN sequence
Length: 115
LSPQDLINAKPVAAAIKEFFGSSQLSQFMDQNNPLSEITHKRRVSALGPGGLTRERAGFEVRDVHQTHYGRVCPIETPEGPNIGLINSLSVYAKANDFGFLETPYRKVVDGRVTD