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OR_07182017_22_scaffold_32_6

Organism: OR_07182017_22_Halothiobacillus_neapolitanus_53_58

near complete RP 51 / 55 BSCG 51 / 51 ASCG 12 / 38 MC: 2
Location: comp(9840..11162)

Top 3 Functional Annotations

Value Algorithm Source
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000256|HAMAP-Rule:MF_01010}; EC=2.1.1.190 {ECO:0000256|HAMAP-Rule:MF_01010};; 23S rRNA(m5U1939)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01010}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.4
  • Coverage: 438.0
  • Bit_score: 624
  • Evalue 8.50e-176
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L0T9_HALNC similarity UNIREF
DB: UNIREF100
  • Identity: 67.4
  • Coverage: 438.0
  • Bit_score: 624
  • Evalue 6.00e-176
TrmA family RNA methyltransferase similarity KEGG
DB: KEGG
  • Identity: 67.4
  • Coverage: 438.0
  • Bit_score: 624
  • Evalue 1.70e-176

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Taxonomy

Halothiobacillus neapolitanus → Halothiobacillus → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1323
GTGCGCTTTCCCAAACTCCCCAAAGGCGAATTTCCCGCCACCATCGAATCACTGACCCAAGAAGGACGCGGGGTGACCCACATCAACGGCAAAACCACCTTCATCAGCCGCGCCTTGCCGGGTGAAGTCATCAAATTTGTCTACACCAACCGCAAAAAACACTTCGATGAGGGCGACGCAACCATCATCGAACAGCCCTCGCCCGACCGTATAAGCCCCGCCTGCCCCCATTTCGAGCAATGCGGCGCCTGCTCTATGCAGCACTTAAGTGCCGAAAAACAAATCGAAGTCAAACAACAAGCCCTGTTCGACCAGGTACAACGCATCGGCAAAACCCAAGCCCAACAGCAACTCCCCCCGCTCACAGGGCCCATCTGGGGCTATCGGCGGCGCGCTCGGCTCGGCGTTAAATACGTCATCAAAAAAGATCGCGTGCTGGTCGGATTTCGCGAACGGCGCAGCCATTTTCTCGCCGATATAAGCCACTGCCCCGTCCTCGACCCCCGCGTGGGCGAACACCTCACCGACATCGCCAACGCCATCGGCACACTCGATGCCCGCGCCACCGTGGCACAAATCGAAGTATCGTGTAGCGATGACCGCACAGCCCTCGTGTTTCGCCACCTAGAACCCCTAAGTCCCCAAGATAAAACCCGCCTGCGTGATTTTGGCCAAGCGCAAGGCTTCGACATCTACCTACAACCCGGCGGCACCGATAGCGTGCATCCGCTCGATCCCACACGCGTAGGCGACCTACACGACCAACAACCCGCCTACCAAATCGCCATCGGCTTCAAACCGCTCGACTTCACCCAAGTTAACGCCGCCATCAACCGCGACATGGTTCAACTCGCCCTAAAATGGCTCGACATCCAGCAAGGCGACCACGCCCTAGACCTCTTCGCCGGCTTGGGCAACTTCACCCTACCCATGGCTCGCTTCGCCCAAACAGTCACCGCCATCGAGCTTGAACCCGCCATGGTGCAACGCGCCGAAGCCTCCGCCCGCACCAATGGCATCACCAACACCCACCACCAAGTGGGCAACCTCTTTGAACCCGACCCCACCCAAGCCTGGATGCAACAAAACTACGAACGCATCCTGCTCGACCCACCCCGTGCCGGCGCCGAGGCCCTAATCCCCCACATCGCCCGCATGCGCCCCAAACGTATTGTCTACATCTCCTGCCATCCCGGCACCCTCGCCCGCGATACCCATACCCTCGTCCACGCGCACGGCTACACCCTCATCGCCGCCGGCGTCATGGACATGTTCCCCCACACCGCCCACATCGAATCCATCGCCGTATTTGAACCCAAATAA
PROTEIN sequence
Length: 441
VRFPKLPKGEFPATIESLTQEGRGVTHINGKTTFISRALPGEVIKFVYTNRKKHFDEGDATIIEQPSPDRISPACPHFEQCGACSMQHLSAEKQIEVKQQALFDQVQRIGKTQAQQQLPPLTGPIWGYRRRARLGVKYVIKKDRVLVGFRERRSHFLADISHCPVLDPRVGEHLTDIANAIGTLDARATVAQIEVSCSDDRTALVFRHLEPLSPQDKTRLRDFGQAQGFDIYLQPGGTDSVHPLDPTRVGDLHDQQPAYQIAIGFKPLDFTQVNAAINRDMVQLALKWLDIQQGDHALDLFAGLGNFTLPMARFAQTVTAIELEPAMVQRAEASARTNGITNTHHQVGNLFEPDPTQAWMQQNYERILLDPPRAGAEALIPHIARMRPKRIVYISCHPGTLARDTHTLVHAHGYTLIAAGVMDMFPHTAHIESIAVFEPK*