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OR_07182017_22_scaffold_32_12

Organism: OR_07182017_22_Halothiobacillus_neapolitanus_53_58

near complete RP 51 / 55 BSCG 51 / 51 ASCG 12 / 38 MC: 2
Location: comp(20121..20987)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.6
  • Coverage: 279.0
  • Bit_score: 378
  • Evalue 5.30e-102
Shikimate dehydrogenase Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KYM2_HALNC similarity UNIREF
DB: UNIREF100
  • Identity: 70.6
  • Coverage: 279.0
  • Bit_score: 378
  • Evalue 3.80e-102
shikimate 5-dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 70.6
  • Coverage: 279.0
  • Bit_score: 378
  • Evalue 1.10e-102

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Taxonomy

Halothiobacillus neapolitanus → Halothiobacillus → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 867
GTGTTAACGAACGCATTAAACCACCCCCATAGCCACTATGGGGTTATTGGCAACCCGATTGGCCACAGCCGCTCGCCGTTAATTCATCAGGCGTTTGCCGCGCAAACCGGCCTATCATTAATCTACACAGCCATTTTGGCGCCCCTAGACGGGTTTGAGGCCACCGTAGCCGCCTTTCGGCAAGAAGGCGGGCGCGGCCTGAATGTGACCGTGCCCTTCAAGGCGCAAGCCTTTGCCCTCTGCCACACGCTCAGTGAACGGGCGGCGCGGGCGGGCGCGGTGAACACCCTGATTTTTCCACCTAATCCCCAAGGTGATGATATCCAGGGTGAAATCCAAGGCGATAACACCGATGGGGTCGGTTTGCTGCAAGATTTTGCGTTTCAGGGCATAAAACTCTTGGGGAAAAAAGTTTTGCTCCTTGGGGCCGGTGGGGCGAGTCGAGGGGTTTTAGCGCCGCTCTTGGCCGAACAGCCTGCCCAATTACGCATCGCTAATCGGCGCGAAAAAACTGCCCAAGCGCTGATCGCTGATTTTGCCGATTTAGCCGATAAAACCGCATTCACCGCCTGCGCGCTTGATACCATCCCCGCCGAACCCTTTGATGTGATTATTAATGCCACCTCAGCGGGTTTGAGTGATACCGAACTCCCCCTGCCCGAGGCGCTGATTCACGCCGATACCGTGGTGTATGACATGGCCTATGGCCACGAGCCCACCGTGTTTATGCGCTGGGGCCAAGCGCGGGGCGCGCAGGCGTTTGATGGTTTAGGCATGTTGGTTGAGCAAGCCGCGCAGAGTTTTTATCTGTGGCACGGGATTTGCCCCGATACCCGCCCCGTGCGGGATTTATTGCGTGCGACTTAA
PROTEIN sequence
Length: 289
VLTNALNHPHSHYGVIGNPIGHSRSPLIHQAFAAQTGLSLIYTAILAPLDGFEATVAAFRQEGGRGLNVTVPFKAQAFALCHTLSERAARAGAVNTLIFPPNPQGDDIQGEIQGDNTDGVGLLQDFAFQGIKLLGKKVLLLGAGGASRGVLAPLLAEQPAQLRIANRREKTAQALIADFADLADKTAFTACALDTIPAEPFDVIINATSAGLSDTELPLPEALIHADTVVYDMAYGHEPTVFMRWGQARGAQAFDGLGMLVEQAAQSFYLWHGICPDTRPVRDLLRAT*